Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 ECEL1P3-201ENST00000427961 737 ntBASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 AC010240.3-201ENST00000607688 395 ntBASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 REXO1L9P-201ENST00000604264 2108 ntBASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RSPO1Q2MKA7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 AL512604.3-201ENST00000569583 964 ntBASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 NEK4P2-201ENST00000580004 1012 ntBASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 AL096828.2-201ENST00000567259 1965 ntBASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RSPO1Q2MKA7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RSPO1Q2MKA7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RSPO1Q2MKA7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.96■□□□□ 0.14
RSPO1Q2MKA7 AC068880.1-201ENST00000507289 2297 ntBASIC15.96■□□□□ 0.14
RSPO1Q2MKA7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RSPO1Q2MKA7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RSPO1Q2MKA7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.95■□□□□ 0.14
RSPO1Q2MKA7 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.95■□□□□ 0.14
RSPO1Q2MKA7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO1Q2MKA7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RSPO1Q2MKA7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO1Q2MKA7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RSPO1Q2MKA7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.95■□□□□ 0.14
RSPO1Q2MKA7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO1Q2MKA7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO1Q2MKA7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.95■□□□□ 0.14
RSPO1Q2MKA7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO1Q2MKA7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.95■□□□□ 0.14
RSPO1Q2MKA7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RSPO1Q2MKA7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.95■□□□□ 0.14
RSPO1Q2MKA7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.95■□□□□ 0.14
RSPO1Q2MKA7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RSPO1Q2MKA7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms