Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC22.27■■□□□ 1.16
RFX7Q2KHR2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC22.27■■□□□ 1.16
RFX7Q2KHR2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC22.27■■□□□ 1.16
RFX7Q2KHR2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RFX7Q2KHR2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RFX7Q2KHR2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RFX7Q2KHR2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC22.27■■□□□ 1.16
RFX7Q2KHR2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RFX7Q2KHR2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RFX7Q2KHR2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC22.27■■□□□ 1.16
RFX7Q2KHR2 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RFX7Q2KHR2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC22.27■■□□□ 1.16
RFX7Q2KHR2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
RFX7Q2KHR2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RFX7Q2KHR2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RFX7Q2KHR2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RFX7Q2KHR2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
RFX7Q2KHR2 AC009113.1-201ENST00000570267 2443 ntBASIC22.27■■□□□ 1.15
RFX7Q2KHR2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
RFX7Q2KHR2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RFX7Q2KHR2 TSSC2-201ENST00000450217 709 ntBASIC22.26■■□□□ 1.15
RFX7Q2KHR2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC22.26■■□□□ 1.15
RFX7Q2KHR2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
RFX7Q2KHR2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFX7Q2KHR2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.26■■□□□ 1.15
RFX7Q2KHR2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RFX7Q2KHR2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFX7Q2KHR2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.26■■□□□ 1.15
RFX7Q2KHR2 SDHAP2-201ENST00000455183 2001 ntBASIC22.26■■□□□ 1.15
RFX7Q2KHR2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC22.26■■□□□ 1.15
RFX7Q2KHR2 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC22.26■■□□□ 1.15
RFX7Q2KHR2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
RFX7Q2KHR2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC22.26■■□□□ 1.15
RFX7Q2KHR2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFX7Q2KHR2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RFX7Q2KHR2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.26■■□□□ 1.15
RFX7Q2KHR2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFX7Q2KHR2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
RFX7Q2KHR2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RFX7Q2KHR2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RFX7Q2KHR2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFX7Q2KHR2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RFX7Q2KHR2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC22.25■■□□□ 1.15
RFX7Q2KHR2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFX7Q2KHR2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RFX7Q2KHR2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFX7Q2KHR2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC22.25■■□□□ 1.15
RFX7Q2KHR2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RFX7Q2KHR2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
RFX7Q2KHR2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC22.25■■□□□ 1.15
RFX7Q2KHR2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RFX7Q2KHR2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC22.25■■□□□ 1.15
RFX7Q2KHR2 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RFX7Q2KHR2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RFX7Q2KHR2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFX7Q2KHR2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFX7Q2KHR2 RNF126P1-202ENST00000569893 925 ntBASIC22.25■■□□□ 1.15
RFX7Q2KHR2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC22.25■■□□□ 1.15
RFX7Q2KHR2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 AL121672.3-201ENST00000608644 468 ntBASIC22.24■■□□□ 1.15
RFX7Q2KHR2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC22.24■■□□□ 1.15
RFX7Q2KHR2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC22.23■■□□□ 1.15
RFX7Q2KHR2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms