Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 AC091607.1-201ENST00000490318 1060 ntBASIC22.05■■□□□ 1.12
PDS5AQ29RF7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PDS5AQ29RF7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 CCS-201ENST00000310190 942 ntTSL 5 BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 FAAHP1-202ENST00000446499 1238 ntBASIC22.04■■□□□ 1.12
PDS5AQ29RF7 UNC93B7-201ENST00000509439 705 ntBASIC22.04■■□□□ 1.12
PDS5AQ29RF7 RN7SL510P-201ENST00000581311 263 ntBASIC22.04■■□□□ 1.12
PDS5AQ29RF7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 AC009154.2-201ENST00000621177 724 ntBASIC22.04■■□□□ 1.12
PDS5AQ29RF7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 NSUN5P1-202ENST00000421140 1535 ntBASIC22.04■■□□□ 1.12
PDS5AQ29RF7 NSUN5P2-203ENST00000457352 1529 ntBASIC22.04■■□□□ 1.12
PDS5AQ29RF7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDS5AQ29RF7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDS5AQ29RF7 LINC00167-201ENST00000530583 1419 ntBASIC22.03■■□□□ 1.12
PDS5AQ29RF7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PDS5AQ29RF7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC22.03■■□□□ 1.12
PDS5AQ29RF7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC22.03■■□□□ 1.12
PDS5AQ29RF7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
PDS5AQ29RF7 CROCCP3-202ENST00000420820 1947 ntBASIC22.03■■□□□ 1.12
PDS5AQ29RF7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
PDS5AQ29RF7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PDS5AQ29RF7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
PDS5AQ29RF7 KRT18P31-201ENST00000506277 1292 ntBASIC22.03■■□□□ 1.12
PDS5AQ29RF7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC22.03■■□□□ 1.12
PDS5AQ29RF7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC22.03■■□□□ 1.12
PDS5AQ29RF7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC22.03■■□□□ 1.12
PDS5AQ29RF7 ABR-217ENST00000572441 563 ntTSL 4 BASIC22.03■■□□□ 1.12
PDS5AQ29RF7 IFNL4P1-201ENST00000607083 540 ntBASIC22.03■■□□□ 1.12
PDS5AQ29RF7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC22.03■■□□□ 1.12
PDS5AQ29RF7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PDS5AQ29RF7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.02■■□□□ 1.12
PDS5AQ29RF7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 TSPY12P-201ENST00000421279 868 ntBASIC22.02■■□□□ 1.12
PDS5AQ29RF7 FOSL1P1-201ENST00000511041 816 ntBASIC22.02■■□□□ 1.12
PDS5AQ29RF7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 AC011840.4-201ENST00000578471 627 ntBASIC22.02■■□□□ 1.12
PDS5AQ29RF7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC22.02■■□□□ 1.12
PDS5AQ29RF7 AL732292.2-201ENST00000609649 430 ntBASIC22.02■■□□□ 1.12
PDS5AQ29RF7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
PDS5AQ29RF7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC22.02■■□□□ 1.11
PDS5AQ29RF7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
PDS5AQ29RF7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PDS5AQ29RF7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms