Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DSC1Q08554 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DSC1Q08554 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.58■□□□□ 0.73
DSC1Q08554 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DSC1Q08554 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DSC1Q08554 AKR1C7P-201ENST00000305623 895 ntBASIC19.58■□□□□ 0.72
DSC1Q08554 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
DSC1Q08554 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.58■□□□□ 0.72
DSC1Q08554 KRT16P4-201ENST00000453883 522 ntBASIC19.58■□□□□ 0.72
DSC1Q08554 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.58■□□□□ 0.72
DSC1Q08554 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.58■□□□□ 0.72
DSC1Q08554 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
DSC1Q08554 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.58■□□□□ 0.72
DSC1Q08554 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
DSC1Q08554 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
DSC1Q08554 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.58■□□□□ 0.72
DSC1Q08554 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.58■□□□□ 0.72
DSC1Q08554 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DSC1Q08554 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DSC1Q08554 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DSC1Q08554 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DSC1Q08554 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DSC1Q08554 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.57■□□□□ 0.72
DSC1Q08554 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DSC1Q08554 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DSC1Q08554 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DSC1Q08554 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.57■□□□□ 0.72
DSC1Q08554 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.57■□□□□ 0.72
DSC1Q08554 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.57■□□□□ 0.72
DSC1Q08554 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.57■□□□□ 0.72
DSC1Q08554 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.57■□□□□ 0.72
DSC1Q08554 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DSC1Q08554 BNIP3P18-201ENST00000593976 575 ntBASIC19.57■□□□□ 0.72
DSC1Q08554 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DSC1Q08554 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DSC1Q08554 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DSC1Q08554 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.57■□□□□ 0.72
DSC1Q08554 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.57■□□□□ 0.72
DSC1Q08554 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.57■□□□□ 0.72
DSC1Q08554 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DSC1Q08554 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DSC1Q08554 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
DSC1Q08554 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
DSC1Q08554 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.56■□□□□ 0.72
DSC1Q08554 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.56■□□□□ 0.72
DSC1Q08554 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
DSC1Q08554 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DSC1Q08554 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
DSC1Q08554 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
DSC1Q08554 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DSC1Q08554 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DSC1Q08554 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DSC1Q08554 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
DSC1Q08554 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.56■□□□□ 0.72
DSC1Q08554 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DSC1Q08554 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.56■□□□□ 0.72
DSC1Q08554 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DSC1Q08554 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.56■□□□□ 0.72
DSC1Q08554 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DSC1Q08554 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.56■□□□□ 0.72
DSC1Q08554 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DSC1Q08554 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DSC1Q08554 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.55■□□□□ 0.72
DSC1Q08554 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DSC1Q08554 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.55■□□□□ 0.72
DSC1Q08554 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.55■□□□□ 0.72
DSC1Q08554 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DSC1Q08554 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.55■□□□□ 0.72
DSC1Q08554 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
DSC1Q08554 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DSC1Q08554 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DSC1Q08554 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DSC1Q08554 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DSC1Q08554 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.55■□□□□ 0.72
DSC1Q08554 NUS1P2-201ENST00000417358 873 ntBASIC19.55■□□□□ 0.72
DSC1Q08554 POM121L3P-201ENST00000419331 1163 ntBASIC19.55■□□□□ 0.72
DSC1Q08554 MINOS1P3-201ENST00000457048 203 ntBASIC19.55■□□□□ 0.72
DSC1Q08554 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.55■□□□□ 0.72
DSC1Q08554 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.55■□□□□ 0.72
DSC1Q08554 AC106795.1-205ENST00000512851 1056 ntBASIC19.55■□□□□ 0.72
DSC1Q08554 AP002469.2-201ENST00000531724 424 ntBASIC19.55■□□□□ 0.72
DSC1Q08554 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
DSC1Q08554 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.55■□□□□ 0.72
DSC1Q08554 AL121912.1-201ENST00000603683 238 ntBASIC19.55■□□□□ 0.72
DSC1Q08554 REXO1L6P-202ENST00000619970 1078 ntBASIC19.55■□□□□ 0.72
DSC1Q08554 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.55■□□□□ 0.72
DSC1Q08554 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DSC1Q08554 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
DSC1Q08554 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DSC1Q08554 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.55■□□□□ 0.72
DSC1Q08554 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.55■□□□□ 0.72
DSC1Q08554 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DSC1Q08554 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DSC1Q08554 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DSC1Q08554 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.55■□□□□ 0.72
DSC1Q08554 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
DSC1Q08554 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DSC1Q08554 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DSC1Q08554 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.54■□□□□ 0.72
DSC1Q08554 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms