Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAE1P78406 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAE1P78406 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAE1P78406 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RAE1P78406 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAE1P78406 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RAE1P78406 AL096828.2-201ENST00000567259 1965 ntBASIC17.5■□□□□ 0.39
RAE1P78406 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAE1P78406 AC138028.4-201ENST00000564984 1845 ntBASIC17.5■□□□□ 0.39
RAE1P78406 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAE1P78406 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
RAE1P78406 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAE1P78406 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAE1P78406 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAE1P78406 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.5■□□□□ 0.39
RAE1P78406 AC104390.1-201ENST00000555663 520 ntBASIC17.5■□□□□ 0.39
RAE1P78406 NAPSB-206ENST00000562112 1266 ntBASIC17.5■□□□□ 0.39
RAE1P78406 FAM87A-204ENST00000613235 858 ntBASIC17.5■□□□□ 0.39
RAE1P78406 AC112497.1-201ENST00000624824 639 ntBASIC17.5■□□□□ 0.39
RAE1P78406 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.5■□□□□ 0.39
RAE1P78406 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAE1P78406 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.5■□□□□ 0.39
RAE1P78406 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.5■□□□□ 0.39
RAE1P78406 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.5■□□□□ 0.39
RAE1P78406 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAE1P78406 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAE1P78406 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAE1P78406 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAE1P78406 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAE1P78406 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
RAE1P78406 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RAE1P78406 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAE1P78406 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAE1P78406 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAE1P78406 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAE1P78406 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAE1P78406 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RAE1P78406 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
RAE1P78406 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RAE1P78406 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.49■□□□□ 0.39
RAE1P78406 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAE1P78406 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAE1P78406 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RAE1P78406 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.49■□□□□ 0.39
RAE1P78406 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RAE1P78406 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAE1P78406 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAE1P78406 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.49■□□□□ 0.39
RAE1P78406 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.49■□□□□ 0.39
RAE1P78406 ECEL1P2-202ENST00000465689 757 ntBASIC17.49■□□□□ 0.39
RAE1P78406 AC093827.2-201ENST00000512654 315 ntBASIC17.49■□□□□ 0.39
RAE1P78406 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.49■□□□□ 0.39
RAE1P78406 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.49■□□□□ 0.39
RAE1P78406 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.49■□□□□ 0.39
RAE1P78406 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.49■□□□□ 0.39
RAE1P78406 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAE1P78406 AC067852.2-201ENST00000590513 2313 ntBASIC17.49■□□□□ 0.39
RAE1P78406 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.49■□□□□ 0.39
RAE1P78406 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAE1P78406 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.49■□□□□ 0.39
RAE1P78406 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RAE1P78406 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAE1P78406 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RAE1P78406 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAE1P78406 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAE1P78406 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAE1P78406 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAE1P78406 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RAE1P78406 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAE1P78406 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAE1P78406 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.48■□□□□ 0.39
RAE1P78406 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAE1P78406 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAE1P78406 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAE1P78406 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RAE1P78406 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.48■□□□□ 0.39
RAE1P78406 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RAE1P78406 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAE1P78406 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAE1P78406 AC128688.1-201ENST00000487626 519 ntBASIC17.48■□□□□ 0.39
RAE1P78406 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.48■□□□□ 0.39
RAE1P78406 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.48■□□□□ 0.39
RAE1P78406 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAE1P78406 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.48■□□□□ 0.39
RAE1P78406 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.48■□□□□ 0.39
RAE1P78406 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.48■□□□□ 0.39
RAE1P78406 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.48■□□□□ 0.39
RAE1P78406 AC066615.1-201ENST00000640911 628 ntBASIC17.48■□□□□ 0.39
RAE1P78406 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAE1P78406 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAE1P78406 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAE1P78406 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.48■□□□□ 0.39
RAE1P78406 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.48■□□□□ 0.39
RAE1P78406 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.48■□□□□ 0.39
RAE1P78406 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAE1P78406 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAE1P78406 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAE1P78406 LINC01126-201ENST00000623515 1646 ntBASIC17.47■□□□□ 0.39
RAE1P78406 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAE1P78406 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms