Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
HIST1H3AP68431 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.12■□□□□ 0.17
HIST1H3AP68431 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.12■□□□□ 0.17
HIST1H3AP68431 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HIST1H3AP68431 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.12■□□□□ 0.17
HIST1H3AP68431 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.12■□□□□ 0.17
HIST1H3AP68431 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HIST1H3AP68431 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.12■□□□□ 0.17
HIST1H3AP68431 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.12■□□□□ 0.17
HIST1H3AP68431 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.12■□□□□ 0.17
HIST1H3AP68431 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.12■□□□□ 0.17
HIST1H3AP68431 AC112497.1-201ENST00000624824 639 ntBASIC16.12■□□□□ 0.17
HIST1H3AP68431 NOC2LP1-202ENST00000452600 2235 ntBASIC16.12■□□□□ 0.17
HIST1H3AP68431 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 ESPNP-201ENST00000270691 2015 ntBASIC16.12■□□□□ 0.17
HIST1H3AP68431 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.12■□□□□ 0.17
HIST1H3AP68431 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HIST1H3AP68431 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
HIST1H3AP68431 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
HIST1H3AP68431 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.11■□□□□ 0.17
HIST1H3AP68431 AC009102.3-201ENST00000623118 1491 ntBASIC16.11■□□□□ 0.17
HIST1H3AP68431 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.11■□□□□ 0.17
HIST1H3AP68431 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
HIST1H3AP68431 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 HMGA1P5-201ENST00000412453 271 ntBASIC16.11■□□□□ 0.17
HIST1H3AP68431 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.11■□□□□ 0.17
HIST1H3AP68431 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.11■□□□□ 0.17
HIST1H3AP68431 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.11■□□□□ 0.17
HIST1H3AP68431 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HIST1H3AP68431 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HIST1H3AP68431 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HIST1H3AP68431 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H3AP68431 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H3AP68431 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H3AP68431 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H3AP68431 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H3AP68431 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H3AP68431 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H3AP68431 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 GMCL1P1-201ENST00000463439 1581 ntBASIC16.1■□□□□ 0.17
HIST1H3AP68431 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H3AP68431 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H3AP68431 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 ECEL1P2-202ENST00000465689 757 ntBASIC16.1■□□□□ 0.17
HIST1H3AP68431 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 AL512604.3-201ENST00000569583 964 ntBASIC16.1■□□□□ 0.17
HIST1H3AP68431 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H3AP68431 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H3AP68431 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
HIST1H3AP68431 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H3AP68431 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
HIST1H3AP68431 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms