Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SEC61A1P61619 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
SEC61A1P61619 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SEC61A1P61619 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
SEC61A1P61619 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SEC61A1P61619 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SEC61A1P61619 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SEC61A1P61619 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SEC61A1P61619 MESTP1-201ENST00000404287 994 ntBASIC16.15■□□□□ 0.18
SEC61A1P61619 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SEC61A1P61619 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SEC61A1P61619 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SEC61A1P61619 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.15■□□□□ 0.18
SEC61A1P61619 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.15■□□□□ 0.18
SEC61A1P61619 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SEC61A1P61619 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.15■□□□□ 0.18
SEC61A1P61619 AC116562.2-201ENST00000507042 360 ntBASIC16.15■□□□□ 0.18
SEC61A1P61619 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.15■□□□□ 0.18
SEC61A1P61619 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.15■□□□□ 0.18
SEC61A1P61619 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.15■□□□□ 0.18
SEC61A1P61619 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SEC61A1P61619 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SEC61A1P61619 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SEC61A1P61619 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SEC61A1P61619 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.15■□□□□ 0.18
SEC61A1P61619 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.15■□□□□ 0.18
SEC61A1P61619 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SEC61A1P61619 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SEC61A1P61619 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.15■□□□□ 0.18
SEC61A1P61619 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
SEC61A1P61619 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SEC61A1P61619 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.15■□□□□ 0.18
SEC61A1P61619 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SEC61A1P61619 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SEC61A1P61619 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.14■□□□□ 0.18
SEC61A1P61619 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.14■□□□□ 0.17
SEC61A1P61619 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SEC61A1P61619 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SEC61A1P61619 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.14■□□□□ 0.17
SEC61A1P61619 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.14■□□□□ 0.17
SEC61A1P61619 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SEC61A1P61619 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SEC61A1P61619 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.14■□□□□ 0.17
SEC61A1P61619 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SEC61A1P61619 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SEC61A1P61619 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SEC61A1P61619 KRT8P9-201ENST00000558927 1449 ntBASIC16.14■□□□□ 0.17
SEC61A1P61619 UNC93B2-201ENST00000285383 730 ntBASIC16.14■□□□□ 0.17
SEC61A1P61619 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SEC61A1P61619 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SEC61A1P61619 MIR1238-201ENST00000408483 83 ntBASIC16.14■□□□□ 0.17
SEC61A1P61619 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SEC61A1P61619 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SEC61A1P61619 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.14■□□□□ 0.17
SEC61A1P61619 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SEC61A1P61619 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SEC61A1P61619 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SEC61A1P61619 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SEC61A1P61619 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SEC61A1P61619 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.14■□□□□ 0.17
SEC61A1P61619 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SEC61A1P61619 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SEC61A1P61619 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SEC61A1P61619 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SEC61A1P61619 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SEC61A1P61619 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SEC61A1P61619 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
SEC61A1P61619 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SEC61A1P61619 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SEC61A1P61619 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SEC61A1P61619 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.13■□□□□ 0.17
SEC61A1P61619 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.13■□□□□ 0.17
SEC61A1P61619 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SEC61A1P61619 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SEC61A1P61619 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.13■□□□□ 0.17
SEC61A1P61619 FP475955.4-201ENST00000623131 1990 ntBASIC16.13■□□□□ 0.17
SEC61A1P61619 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SEC61A1P61619 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SEC61A1P61619 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.13■□□□□ 0.17
SEC61A1P61619 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.13■□□□□ 0.17
SEC61A1P61619 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.13■□□□□ 0.17
SEC61A1P61619 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SEC61A1P61619 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SEC61A1P61619 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SEC61A1P61619 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.13■□□□□ 0.17
SEC61A1P61619 B3GAT3P1-201ENST00000471720 806 ntBASIC16.13■□□□□ 0.17
SEC61A1P61619 AC011506.1-201ENST00000474329 610 ntBASIC16.13■□□□□ 0.17
SEC61A1P61619 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.13■□□□□ 0.17
SEC61A1P61619 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SEC61A1P61619 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.13■□□□□ 0.17
SEC61A1P61619 MIR6786-201ENST00000616843 113 ntBASIC16.13■□□□□ 0.17
SEC61A1P61619 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.13■□□□□ 0.17
SEC61A1P61619 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.13■□□□□ 0.17
SEC61A1P61619 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SEC61A1P61619 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
SEC61A1P61619 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SEC61A1P61619 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SEC61A1P61619 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SEC61A1P61619 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SEC61A1P61619 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms