Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.77■■□□□ 1.08
RHBDL3P58872 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.77■■□□□ 1.08
RHBDL3P58872 AC011840.4-201ENST00000578471 627 ntBASIC21.77■■□□□ 1.08
RHBDL3P58872 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.77■■□□□ 1.08
RHBDL3P58872 BNIP3P18-201ENST00000593976 575 ntBASIC21.77■■□□□ 1.08
RHBDL3P58872 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.77■■□□□ 1.08
RHBDL3P58872 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RHBDL3P58872 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RHBDL3P58872 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RHBDL3P58872 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RHBDL3P58872 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.77■■□□□ 1.08
RHBDL3P58872 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
RHBDL3P58872 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.77■■□□□ 1.07
RHBDL3P58872 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RHBDL3P58872 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.76■■□□□ 1.07
RHBDL3P58872 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RHBDL3P58872 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.76■■□□□ 1.07
RHBDL3P58872 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RHBDL3P58872 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RHBDL3P58872 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.76■■□□□ 1.07
RHBDL3P58872 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
RHBDL3P58872 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RHBDL3P58872 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RHBDL3P58872 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.76■■□□□ 1.07
RHBDL3P58872 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.76■■□□□ 1.07
RHBDL3P58872 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.76■■□□□ 1.07
RHBDL3P58872 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RHBDL3P58872 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RHBDL3P58872 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RHBDL3P58872 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
RHBDL3P58872 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RHBDL3P58872 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RHBDL3P58872 AC005082.1-201ENST00000413042 2259 ntBASIC21.76■■□□□ 1.07
RHBDL3P58872 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.76■■□□□ 1.07
RHBDL3P58872 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.75■■□□□ 1.07
RHBDL3P58872 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RHBDL3P58872 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RHBDL3P58872 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RHBDL3P58872 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RHBDL3P58872 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.75■■□□□ 1.07
RHBDL3P58872 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RHBDL3P58872 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RHBDL3P58872 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RHBDL3P58872 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.75■■□□□ 1.07
RHBDL3P58872 AC068472.1-201ENST00000474589 881 ntBASIC21.75■■□□□ 1.07
RHBDL3P58872 VENTXP7-201ENST00000475503 772 ntBASIC21.75■■□□□ 1.07
RHBDL3P58872 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RHBDL3P58872 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RHBDL3P58872 AL160237.2-201ENST00000556165 472 ntBASIC21.75■■□□□ 1.07
RHBDL3P58872 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RHBDL3P58872 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.75■■□□□ 1.07
RHBDL3P58872 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
RHBDL3P58872 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.75■■□□□ 1.07
RHBDL3P58872 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RHBDL3P58872 ANO7L1-203ENST00000602586 1720 ntBASIC21.75■■□□□ 1.07
RHBDL3P58872 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDL3P58872 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.74■■□□□ 1.07
RHBDL3P58872 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDL3P58872 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDL3P58872 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDL3P58872 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
RHBDL3P58872 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RHBDL3P58872 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDL3P58872 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.74■■□□□ 1.07
RHBDL3P58872 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDL3P58872 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDL3P58872 AC008687.5-201ENST00000593746 558 ntBASIC21.74■■□□□ 1.07
RHBDL3P58872 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.74■■□□□ 1.07
RHBDL3P58872 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.74■■□□□ 1.07
RHBDL3P58872 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDL3P58872 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDL3P58872 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDL3P58872 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.74■■□□□ 1.07
RHBDL3P58872 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.74■■□□□ 1.07
RHBDL3P58872 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDL3P58872 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.74■■□□□ 1.07
RHBDL3P58872 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDL3P58872 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDL3P58872 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDL3P58872 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDL3P58872 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RHBDL3P58872 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.73■■□□□ 1.07
RHBDL3P58872 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.73■■□□□ 1.07
RHBDL3P58872 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RHBDL3P58872 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RHBDL3P58872 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.73■■□□□ 1.07
RHBDL3P58872 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.73■■□□□ 1.07
RHBDL3P58872 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RHBDL3P58872 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RHBDL3P58872 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.73■■□□□ 1.07
RHBDL3P58872 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.73■■□□□ 1.07
RHBDL3P58872 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.73■■□□□ 1.07
RHBDL3P58872 AC005336.2-201ENST00000593183 939 ntBASIC21.73■■□□□ 1.07
RHBDL3P58872 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RHBDL3P58872 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.73■■□□□ 1.07
RHBDL3P58872 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RHBDL3P58872 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.73■■□□□ 1.07
RHBDL3P58872 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RHBDL3P58872 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RHBDL3P58872 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms