Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 AC073912.3-201ENST00000624414 853 ntBASIC17.96■□□□□ 0.47
AP1S2P56377 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
AP1S2P56377 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
AP1S2P56377 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.96■□□□□ 0.47
AP1S2P56377 AL354751.1-201ENST00000412768 1863 ntBASIC17.96■□□□□ 0.47
AP1S2P56377 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
AP1S2P56377 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S2P56377 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S2P56377 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.96■□□□□ 0.47
AP1S2P56377 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
AP1S2P56377 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
AP1S2P56377 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.96■□□□□ 0.46
AP1S2P56377 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S2P56377 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S2P56377 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S2P56377 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S2P56377 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.95■□□□□ 0.46
AP1S2P56377 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
AP1S2P56377 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
AP1S2P56377 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.95■□□□□ 0.46
AP1S2P56377 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
AP1S2P56377 ECEL1P3-201ENST00000427961 737 ntBASIC17.95■□□□□ 0.46
AP1S2P56377 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
AP1S2P56377 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.95■□□□□ 0.46
AP1S2P56377 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.95■□□□□ 0.46
AP1S2P56377 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.95■□□□□ 0.46
AP1S2P56377 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.95■□□□□ 0.46
AP1S2P56377 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.95■□□□□ 0.46
AP1S2P56377 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S2P56377 ABALON-201ENST00000629058 1903 ntBASIC17.95■□□□□ 0.46
AP1S2P56377 HCG11-201ENST00000411553 5696 ntBASIC17.95■□□□□ 0.46
AP1S2P56377 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.95■□□□□ 0.46
AP1S2P56377 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.95■□□□□ 0.46
AP1S2P56377 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S2P56377 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S2P56377 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S2P56377 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
AP1S2P56377 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
AP1S2P56377 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S2P56377 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S2P56377 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S2P56377 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.94■□□□□ 0.46
AP1S2P56377 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.94■□□□□ 0.46
AP1S2P56377 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S2P56377 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.94■□□□□ 0.46
AP1S2P56377 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S2P56377 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
AP1S2P56377 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S2P56377 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S2P56377 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.94■□□□□ 0.46
AP1S2P56377 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S2P56377 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
AP1S2P56377 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S2P56377 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S2P56377 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.94■□□□□ 0.46
AP1S2P56377 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
AP1S2P56377 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S2P56377 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.94■□□□□ 0.46
AP1S2P56377 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S2P56377 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.94■□□□□ 0.46
AP1S2P56377 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.94■□□□□ 0.46
AP1S2P56377 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.94■□□□□ 0.46
AP1S2P56377 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
AP1S2P56377 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
AP1S2P56377 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
AP1S2P56377 GMCL1P1-201ENST00000463439 1581 ntBASIC17.94■□□□□ 0.46
AP1S2P56377 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S2P56377 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
AP1S2P56377 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.94■□□□□ 0.46
AP1S2P56377 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.94■□□□□ 0.46
AP1S2P56377 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S2P56377 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S2P56377 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S2P56377 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S2P56377 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP1S2P56377 AL390961.4-201ENST00000623958 2535 ntBASIC17.94■□□□□ 0.46
AP1S2P56377 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.93■□□□□ 0.46
AP1S2P56377 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S2P56377 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S2P56377 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S2P56377 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.93■□□□□ 0.46
AP1S2P56377 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S2P56377 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
AP1S2P56377 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
AP1S2P56377 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.93■□□□□ 0.46
AP1S2P56377 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.93■□□□□ 0.46
AP1S2P56377 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.93■□□□□ 0.46
AP1S2P56377 AC010240.3-201ENST00000607688 395 ntBASIC17.93■□□□□ 0.46
AP1S2P56377 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.93■□□□□ 0.46
AP1S2P56377 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.93■□□□□ 0.46
AP1S2P56377 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S2P56377 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.93■□□□□ 0.46
AP1S2P56377 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S2P56377 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S2P56377 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.93■□□□□ 0.46
AP1S2P56377 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S2P56377 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S2P56377 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP1S2P56377 SDHAP2-201ENST00000455183 2001 ntBASIC17.93■□□□□ 0.46
AP1S2P56377 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms