Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CDH13P55290 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH13P55290 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDH13P55290 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CDH13P55290 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH13P55290 AL158047.1-201ENST00000445918 881 ntBASIC18.06■□□□□ 0.48
CDH13P55290 AC098590.1-201ENST00000468126 897 ntBASIC18.06■□□□□ 0.48
CDH13P55290 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDH13P55290 AC116562.2-201ENST00000507042 360 ntBASIC18.06■□□□□ 0.48
CDH13P55290 NUDT16P1-203ENST00000513809 620 ntBASIC18.06■□□□□ 0.48
CDH13P55290 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH13P55290 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.06■□□□□ 0.48
CDH13P55290 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.06■□□□□ 0.48
CDH13P55290 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CDH13P55290 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH13P55290 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH13P55290 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CDH13P55290 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CDH13P55290 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDH13P55290 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.06■□□□□ 0.48
CDH13P55290 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH13P55290 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH13P55290 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH13P55290 REXO1L9P-201ENST00000604264 2108 ntBASIC18.05■□□□□ 0.48
CDH13P55290 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH13P55290 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH13P55290 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDH13P55290 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH13P55290 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH13P55290 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH13P55290 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CDH13P55290 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH13P55290 MIR564-202ENST00000385049 94 ntBASIC18.05■□□□□ 0.48
CDH13P55290 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CDH13P55290 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH13P55290 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.05■□□□□ 0.48
CDH13P55290 KRT18P41-201ENST00000518924 1277 ntBASIC18.05■□□□□ 0.48
CDH13P55290 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH13P55290 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH13P55290 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH13P55290 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CDH13P55290 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH13P55290 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDH13P55290 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH13P55290 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.05■□□□□ 0.48
CDH13P55290 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH13P55290 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.05■□□□□ 0.48
CDH13P55290 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDH13P55290 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH13P55290 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CDH13P55290 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH13P55290 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CDH13P55290 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH13P55290 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH13P55290 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH13P55290 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDH13P55290 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH13P55290 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CDH13P55290 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH13P55290 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH13P55290 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.04■□□□□ 0.48
CDH13P55290 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH13P55290 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH13P55290 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDH13P55290 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH13P55290 MCCD1P1-208ENST00000445732 328 ntBASIC18.04■□□□□ 0.48
CDH13P55290 AC097488.1-201ENST00000507834 756 ntBASIC18.04■□□□□ 0.48
CDH13P55290 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH13P55290 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH13P55290 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDH13P55290 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH13P55290 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH13P55290 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDH13P55290 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDH13P55290 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH13P55290 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH13P55290 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH13P55290 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH13P55290 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH13P55290 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.04■□□□□ 0.48
CDH13P55290 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CDH13P55290 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDH13P55290 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms