Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.73■□□□□ 0.75
VCPP55072 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
VCPP55072 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPP55072 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPP55072 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.73■□□□□ 0.75
VCPP55072 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.73■□□□□ 0.75
VCPP55072 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPP55072 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.73■□□□□ 0.75
VCPP55072 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPP55072 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCPP55072 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.73■□□□□ 0.75
VCPP55072 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.73■□□□□ 0.75
VCPP55072 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
VCPP55072 AC104692.2-201ENST00000603054 253 ntBASIC19.73■□□□□ 0.75
VCPP55072 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
VCPP55072 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCPP55072 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.73■□□□□ 0.75
VCPP55072 AL512353.2-201ENST00000448759 1962 ntBASIC19.73■□□□□ 0.75
VCPP55072 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
VCPP55072 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPP55072 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPP55072 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCPP55072 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPP55072 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCPP55072 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VCPP55072 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VCPP55072 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
VCPP55072 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.72■□□□□ 0.75
VCPP55072 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
VCPP55072 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.72■□□□□ 0.75
VCPP55072 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.72■□□□□ 0.75
VCPP55072 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 GCSHP2-201ENST00000560971 527 ntBASIC19.72■□□□□ 0.75
VCPP55072 MIR3180-1-201ENST00000580374 94 ntBASIC19.72■□□□□ 0.75
VCPP55072 MIR3180-3-201ENST00000584616 94 ntBASIC19.72■□□□□ 0.75
VCPP55072 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.72■□□□□ 0.75
VCPP55072 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
VCPP55072 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.72■□□□□ 0.75
VCPP55072 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VCPP55072 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.72■□□□□ 0.75
VCPP55072 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VCPP55072 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
VCPP55072 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VCPP55072 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCPP55072 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCPP55072 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCPP55072 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.71■□□□□ 0.75
VCPP55072 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.71■□□□□ 0.75
VCPP55072 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCPP55072 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.71■□□□□ 0.75
VCPP55072 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.71■□□□□ 0.75
VCPP55072 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.71■□□□□ 0.75
VCPP55072 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.71■□□□□ 0.75
VCPP55072 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCPP55072 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.71■□□□□ 0.75
VCPP55072 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VCPP55072 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VCPP55072 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
VCPP55072 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCPP55072 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCPP55072 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCPP55072 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.71■□□□□ 0.75
VCPP55072 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VCPP55072 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCPP55072 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCPP55072 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VCPP55072 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCPP55072 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
VCPP55072 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.71■□□□□ 0.75
VCPP55072 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
VCPP55072 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPP55072 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.7■□□□□ 0.74
VCPP55072 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPP55072 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VCPP55072 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.7■□□□□ 0.74
VCPP55072 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.7■□□□□ 0.74
VCPP55072 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPP55072 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPP55072 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPP55072 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCPP55072 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms