Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB3P54753 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.25■□□□□ 0.67
EPHB3P54753 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
EPHB3P54753 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.25■□□□□ 0.67
EPHB3P54753 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.25■□□□□ 0.67
EPHB3P54753 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
EPHB3P54753 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.25■□□□□ 0.67
EPHB3P54753 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
EPHB3P54753 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.24■□□□□ 0.67
EPHB3P54753 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
EPHB3P54753 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.24■□□□□ 0.67
EPHB3P54753 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.24■□□□□ 0.67
EPHB3P54753 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.24■□□□□ 0.67
EPHB3P54753 KRT18P31-201ENST00000506277 1292 ntBASIC19.24■□□□□ 0.67
EPHB3P54753 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.24■□□□□ 0.67
EPHB3P54753 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.24■□□□□ 0.67
EPHB3P54753 AC011840.4-201ENST00000578471 627 ntBASIC19.24■□□□□ 0.67
EPHB3P54753 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.24■□□□□ 0.67
EPHB3P54753 AC004263.2-201ENST00000617183 678 ntBASIC19.24■□□□□ 0.67
EPHB3P54753 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.24■□□□□ 0.67
EPHB3P54753 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.24■□□□□ 0.67
EPHB3P54753 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.24■□□□□ 0.67
EPHB3P54753 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.24■□□□□ 0.67
EPHB3P54753 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.24■□□□□ 0.67
EPHB3P54753 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.24■□□□□ 0.67
EPHB3P54753 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.24■□□□□ 0.67
EPHB3P54753 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB3P54753 MYLKP1-201ENST00000509077 1580 ntBASIC19.23■□□□□ 0.67
EPHB3P54753 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB3P54753 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB3P54753 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.23■□□□□ 0.67
EPHB3P54753 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.23■□□□□ 0.67
EPHB3P54753 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.23■□□□□ 0.67
EPHB3P54753 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.23■□□□□ 0.67
EPHB3P54753 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB3P54753 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB3P54753 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB3P54753 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB3P54753 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB3P54753 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.23■□□□□ 0.67
EPHB3P54753 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.23■□□□□ 0.67
EPHB3P54753 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB3P54753 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.23■□□□□ 0.67
EPHB3P54753 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.23■□□□□ 0.67
EPHB3P54753 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.23■□□□□ 0.67
EPHB3P54753 AC099336.1-202ENST00000602961 463 ntBASIC19.23■□□□□ 0.67
EPHB3P54753 AC138894.3-201ENST00000603787 634 ntBASIC19.23■□□□□ 0.67
EPHB3P54753 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB3P54753 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB3P54753 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB3P54753 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB3P54753 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB3P54753 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
EPHB3P54753 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
EPHB3P54753 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB3P54753 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.22■□□□□ 0.67
EPHB3P54753 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB3P54753 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB3P54753 AC116562.4-201ENST00000641316 2276 ntBASIC19.22■□□□□ 0.67
EPHB3P54753 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB3P54753 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.22■□□□□ 0.67
EPHB3P54753 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB3P54753 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB3P54753 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
EPHB3P54753 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB3P54753 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.22■□□□□ 0.67
EPHB3P54753 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB3P54753 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB3P54753 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
EPHB3P54753 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB3P54753 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.22■□□□□ 0.67
EPHB3P54753 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB3P54753 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB3P54753 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB3P54753 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
EPHB3P54753 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB3P54753 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB3P54753 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB3P54753 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.22■□□□□ 0.67
EPHB3P54753 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHB3P54753 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms