Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATXN3P54252 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
ATXN3P54252 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.82■□□□□ 0.6
ATXN3P54252 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATXN3P54252 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.82■□□□□ 0.6
ATXN3P54252 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.82■□□□□ 0.6
ATXN3P54252 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATXN3P54252 AC111152.3-201ENST00000569699 673 ntBASIC18.82■□□□□ 0.6
ATXN3P54252 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.82■□□□□ 0.6
ATXN3P54252 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATXN3P54252 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.82■□□□□ 0.6
ATXN3P54252 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATXN3P54252 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATXN3P54252 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATXN3P54252 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATXN3P54252 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATXN3P54252 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ATXN3P54252 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATXN3P54252 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.82■□□□□ 0.6
ATXN3P54252 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ATXN3P54252 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ATXN3P54252 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATXN3P54252 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3P54252 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3P54252 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3P54252 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.81■□□□□ 0.6
ATXN3P54252 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3P54252 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3P54252 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3P54252 KRT8P41-201ENST00000533985 1514 ntBASIC18.81■□□□□ 0.6
ATXN3P54252 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.81■□□□□ 0.6
ATXN3P54252 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3P54252 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3P54252 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3P54252 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3P54252 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3P54252 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.81■□□□□ 0.6
ATXN3P54252 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.81■□□□□ 0.6
ATXN3P54252 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3P54252 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATXN3P54252 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3P54252 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.81■□□□□ 0.6
ATXN3P54252 HTR7P1-202ENST00000624664 4411 ntBASIC18.81■□□□□ 0.6
ATXN3P54252 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3P54252 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATXN3P54252 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.8■□□□□ 0.6
ATXN3P54252 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.8■□□□□ 0.6
ATXN3P54252 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ATXN3P54252 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ATXN3P54252 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ATXN3P54252 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.8■□□□□ 0.6
ATXN3P54252 AL645929.1-201ENST00000420084 975 ntBASIC18.8■□□□□ 0.6
ATXN3P54252 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.8■□□□□ 0.6
ATXN3P54252 AC034232.1-201ENST00000506026 1064 ntBASIC18.8■□□□□ 0.6
ATXN3P54252 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.8■□□□□ 0.6
ATXN3P54252 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.8■□□□□ 0.6
ATXN3P54252 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 HYMAI.1-201ENST00000620949 238 ntBASIC18.8■□□□□ 0.6
ATXN3P54252 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.8■□□□□ 0.6
ATXN3P54252 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.8■□□□□ 0.6
ATXN3P54252 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ATXN3P54252 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
ATXN3P54252 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ATXN3P54252 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
ATXN3P54252 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATXN3P54252 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3P54252 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
ATXN3P54252 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATXN3P54252 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3P54252 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3P54252 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3P54252 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3P54252 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3P54252 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3P54252 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.79■□□□□ 0.6
ATXN3P54252 SPDYE15P-201ENST00000424157 909 ntBASIC18.79■□□□□ 0.6
ATXN3P54252 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATXN3P54252 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.79■□□□□ 0.6
ATXN3P54252 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.79■□□□□ 0.6
ATXN3P54252 RN7SL510P-201ENST00000581311 263 ntBASIC18.79■□□□□ 0.6
ATXN3P54252 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms