Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.02■□□□□ 0.64
NEK3P51956 YBX1P2-201ENST00000489612 999 ntBASIC19.02■□□□□ 0.64
NEK3P51956 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.02■□□□□ 0.64
NEK3P51956 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.02■□□□□ 0.64
NEK3P51956 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.02■□□□□ 0.64
NEK3P51956 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK3P51956 LINC01238-205ENST00000567549 1107 ntBASIC19.02■□□□□ 0.64
NEK3P51956 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.02■□□□□ 0.64
NEK3P51956 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.02■□□□□ 0.64
NEK3P51956 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.02■□□□□ 0.64
NEK3P51956 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.02■□□□□ 0.64
NEK3P51956 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
NEK3P51956 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NEK3P51956 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NEK3P51956 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
NEK3P51956 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
NEK3P51956 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.02■□□□□ 0.63
NEK3P51956 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
NEK3P51956 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK3P51956 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK3P51956 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK3P51956 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK3P51956 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK3P51956 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NEK3P51956 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK3P51956 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.01■□□□□ 0.63
NEK3P51956 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NEK3P51956 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK3P51956 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK3P51956 RNF152P1-201ENST00000397754 604 ntBASIC19.01■□□□□ 0.63
NEK3P51956 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NEK3P51956 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NEK3P51956 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.01■□□□□ 0.63
NEK3P51956 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.01■□□□□ 0.63
NEK3P51956 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NEK3P51956 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NEK3P51956 WWOX-216ENST00000569818 525 ntBASIC19.01■□□□□ 0.63
NEK3P51956 MIR4674-201ENST00000582457 87 ntBASIC19.01■□□□□ 0.63
NEK3P51956 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK3P51956 AL031432.5-201ENST00000641059 760 ntBASIC19.01■□□□□ 0.63
NEK3P51956 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK3P51956 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.01■□□□□ 0.63
NEK3P51956 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NEK3P51956 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.01■□□□□ 0.63
NEK3P51956 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NEK3P51956 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK3P51956 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.01■□□□□ 0.63
NEK3P51956 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.01■□□□□ 0.63
NEK3P51956 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NEK3P51956 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK3P51956 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NEK3P51956 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
NEK3P51956 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK3P51956 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19■□□□□ 0.63
NEK3P51956 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NEK3P51956 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19■□□□□ 0.63
NEK3P51956 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
NEK3P51956 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19■□□□□ 0.63
NEK3P51956 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NEK3P51956 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19■□□□□ 0.63
NEK3P51956 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19■□□□□ 0.63
NEK3P51956 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
NEK3P51956 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK3P51956 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NEK3P51956 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK3P51956 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK3P51956 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK3P51956 AP000523.1-201ENST00000398242 1049 ntBASIC19■□□□□ 0.63
NEK3P51956 AC063952.2-201ENST00000498792 1227 ntBASIC19■□□□□ 0.63
NEK3P51956 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NEK3P51956 AC022616.7-201ENST00000525383 220 ntBASIC19■□□□□ 0.63
NEK3P51956 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19■□□□□ 0.63
NEK3P51956 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19■□□□□ 0.63
NEK3P51956 NTF6B-201ENST00000591913 560 ntBASIC19■□□□□ 0.63
NEK3P51956 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19■□□□□ 0.63
NEK3P51956 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19■□□□□ 0.63
NEK3P51956 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NEK3P51956 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19■□□□□ 0.63
NEK3P51956 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
NEK3P51956 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK3P51956 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19■□□□□ 0.63
NEK3P51956 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19■□□□□ 0.63
NEK3P51956 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19■□□□□ 0.63
NEK3P51956 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK3P51956 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK3P51956 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19■□□□□ 0.63
NEK3P51956 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19■□□□□ 0.63
NEK3P51956 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK3P51956 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19■□□□□ 0.63
NEK3P51956 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEK3P51956 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEK3P51956 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.99■□□□□ 0.63
NEK3P51956 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEK3P51956 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEK3P51956 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NEK3P51956 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.99■□□□□ 0.63
NEK3P51956 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEK3P51956 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NEK3P51956 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.99■□□□□ 0.63
NEK3P51956 AC008622.2-201ENST00000617006 1229 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms