Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL12P48061 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.31■□□□□ 0.52
CXCL12P48061 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CXCL12P48061 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.31■□□□□ 0.52
CXCL12P48061 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.31■□□□□ 0.52
CXCL12P48061 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
CXCL12P48061 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.31■□□□□ 0.52
CXCL12P48061 AC092910.1-201ENST00000482027 1129 ntBASIC18.31■□□□□ 0.52
CXCL12P48061 AC010327.4-202ENST00000591484 748 ntBASIC18.31■□□□□ 0.52
CXCL12P48061 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.31■□□□□ 0.52
CXCL12P48061 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.31■□□□□ 0.52
CXCL12P48061 AC083906.6-201ENST00000641366 219 ntBASIC18.31■□□□□ 0.52
CXCL12P48061 AC079781.4-201ENST00000641908 219 ntBASIC18.31■□□□□ 0.52
CXCL12P48061 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL12P48061 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL12P48061 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL12P48061 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CXCL12P48061 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.31■□□□□ 0.52
CXCL12P48061 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL12P48061 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL12P48061 HEIH-201ENST00000623091 1652 ntBASIC18.31■□□□□ 0.52
CXCL12P48061 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL12P48061 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CXCL12P48061 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CXCL12P48061 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL12P48061 AC141586.3-201ENST00000562166 1838 ntBASIC18.3■□□□□ 0.52
CXCL12P48061 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL12P48061 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL12P48061 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CXCL12P48061 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL12P48061 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.3■□□□□ 0.52
CXCL12P48061 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.3■□□□□ 0.52
CXCL12P48061 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CXCL12P48061 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.3■□□□□ 0.52
CXCL12P48061 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.3■□□□□ 0.52
CXCL12P48061 RPSAP43-201ENST00000402237 625 ntBASIC18.3■□□□□ 0.52
CXCL12P48061 PMS2P2-201ENST00000425039 1128 ntBASIC18.3■□□□□ 0.52
CXCL12P48061 HMGN1P19-201ENST00000436976 333 ntBASIC18.3■□□□□ 0.52
CXCL12P48061 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.3■□□□□ 0.52
CXCL12P48061 KRT18P3-201ENST00000451602 1288 ntBASIC18.3■□□□□ 0.52
CXCL12P48061 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.3■□□□□ 0.52
CXCL12P48061 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.3■□□□□ 0.52
CXCL12P48061 OR7E14P-202ENST00000530490 1290 ntBASIC18.3■□□□□ 0.52
CXCL12P48061 SART3-203ENST00000546611 1184 ntBASIC18.3■□□□□ 0.52
CXCL12P48061 AC034105.1-201ENST00000563488 319 ntBASIC18.3■□□□□ 0.52
CXCL12P48061 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.3■□□□□ 0.52
CXCL12P48061 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.3■□□□□ 0.52
CXCL12P48061 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.3■□□□□ 0.52
CXCL12P48061 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CXCL12P48061 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL12P48061 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL12P48061 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL12P48061 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL12P48061 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL12P48061 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL12P48061 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CXCL12P48061 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.3■□□□□ 0.52
CXCL12P48061 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL12P48061 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.29■□□□□ 0.52
CXCL12P48061 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.29■□□□□ 0.52
CXCL12P48061 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.29■□□□□ 0.52
CXCL12P48061 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL12P48061 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.29■□□□□ 0.52
CXCL12P48061 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL12P48061 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL12P48061 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL12P48061 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL12P48061 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL12P48061 MIR149-201ENST00000384879 89 ntBASIC18.29■□□□□ 0.52
CXCL12P48061 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.29■□□□□ 0.52
CXCL12P48061 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.29■□□□□ 0.52
CXCL12P48061 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL12P48061 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.29■□□□□ 0.52
CXCL12P48061 ABCD1P5-201ENST00000445663 754 ntBASIC18.29■□□□□ 0.52
CXCL12P48061 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.29■□□□□ 0.52
CXCL12P48061 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.29■□□□□ 0.52
CXCL12P48061 AC011467.2-201ENST00000598425 242 ntBASIC18.29■□□□□ 0.52
CXCL12P48061 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.29■□□□□ 0.52
CXCL12P48061 AL355385.1-201ENST00000606123 409 ntBASIC18.29■□□□□ 0.52
CXCL12P48061 Z83851.2-201ENST00000609564 659 ntBASIC18.29■□□□□ 0.52
CXCL12P48061 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.29■□□□□ 0.52
CXCL12P48061 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL12P48061 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL12P48061 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.29■□□□□ 0.52
CXCL12P48061 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL12P48061 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CXCL12P48061 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL12P48061 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
CXCL12P48061 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CXCL12P48061 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CXCL12P48061 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.29■□□□□ 0.52
CXCL12P48061 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.29■□□□□ 0.52
CXCL12P48061 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.28■□□□□ 0.52
CXCL12P48061 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXCL12P48061 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CXCL12P48061 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.28■□□□□ 0.52
CXCL12P48061 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CXCL12P48061 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CXCL12P48061 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CXCL12P48061 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms