Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NR4A2P43354 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NR4A2P43354 NBPF21P-201ENST00000425093 1451 ntBASIC16.76■□□□□ 0.27
NR4A2P43354 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NR4A2P43354 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NR4A2P43354 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.76■□□□□ 0.27
NR4A2P43354 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NR4A2P43354 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
NR4A2P43354 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NR4A2P43354 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NR4A2P43354 FAM210CP-201ENST00000445714 574 ntBASIC16.76■□□□□ 0.27
NR4A2P43354 KRT16P5-201ENST00000455284 522 ntBASIC16.76■□□□□ 0.27
NR4A2P43354 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NR4A2P43354 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.76■□□□□ 0.27
NR4A2P43354 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.76■□□□□ 0.27
NR4A2P43354 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NR4A2P43354 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.76■□□□□ 0.27
NR4A2P43354 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NR4A2P43354 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.76■□□□□ 0.27
NR4A2P43354 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NR4A2P43354 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.76■□□□□ 0.27
NR4A2P43354 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NR4A2P43354 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NR4A2P43354 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NR4A2P43354 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NR4A2P43354 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NR4A2P43354 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NR4A2P43354 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NR4A2P43354 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NR4A2P43354 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NR4A2P43354 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.75■□□□□ 0.27
NR4A2P43354 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.75■□□□□ 0.27
NR4A2P43354 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
NR4A2P43354 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NR4A2P43354 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NR4A2P43354 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NR4A2P43354 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NR4A2P43354 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NR4A2P43354 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NR4A2P43354 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NR4A2P43354 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NR4A2P43354 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NR4A2P43354 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NR4A2P43354 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NR4A2P43354 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NR4A2P43354 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.75■□□□□ 0.27
NR4A2P43354 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.75■□□□□ 0.27
NR4A2P43354 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.75■□□□□ 0.27
NR4A2P43354 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.75■□□□□ 0.27
NR4A2P43354 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.75■□□□□ 0.27
NR4A2P43354 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.75■□□□□ 0.27
NR4A2P43354 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NR4A2P43354 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.75■□□□□ 0.27
NR4A2P43354 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.75■□□□□ 0.27
NR4A2P43354 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.75■□□□□ 0.27
NR4A2P43354 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NR4A2P43354 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.75■□□□□ 0.27
NR4A2P43354 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NR4A2P43354 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.75■□□□□ 0.27
NR4A2P43354 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.75■□□□□ 0.27
NR4A2P43354 AC124283.5-201ENST00000624661 1809 ntBASIC16.75■□□□□ 0.27
NR4A2P43354 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.75■□□□□ 0.27
NR4A2P43354 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NR4A2P43354 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR4A2P43354 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NR4A2P43354 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR4A2P43354 BCL2-203ENST00000589955 5011 ntBASIC16.74■□□□□ 0.27
NR4A2P43354 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR4A2P43354 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NR4A2P43354 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NR4A2P43354 HTR7P1-201ENST00000538670 1336 ntBASIC16.74■□□□□ 0.27
NR4A2P43354 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NR4A2P43354 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
NR4A2P43354 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR4A2P43354 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
NR4A2P43354 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR4A2P43354 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NR4A2P43354 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR4A2P43354 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR4A2P43354 HLA-G-202ENST00000376815 851 ntBASIC16.74■□□□□ 0.27
NR4A2P43354 HLA-G-203ENST00000376818 1127 ntBASIC16.74■□□□□ 0.27
NR4A2P43354 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NR4A2P43354 AL353807.1-201ENST00000427475 662 ntBASIC16.74■□□□□ 0.27
NR4A2P43354 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.74■□□□□ 0.27
NR4A2P43354 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.74■□□□□ 0.27
NR4A2P43354 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.74■□□□□ 0.27
NR4A2P43354 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.74■□□□□ 0.27
NR4A2P43354 AF186192.3-201ENST00000583427 947 ntBASIC16.74■□□□□ 0.27
NR4A2P43354 LINC00896-202ENST00000609602 2128 ntBASIC16.74■□□□□ 0.27
NR4A2P43354 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NR4A2P43354 FP475955.4-201ENST00000623131 1990 ntBASIC16.74■□□□□ 0.27
NR4A2P43354 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR4A2P43354 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR4A2P43354 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR4A2P43354 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NR4A2P43354 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR4A2P43354 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.74■□□□□ 0.27
NR4A2P43354 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NR4A2P43354 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NR4A2P43354 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms