Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 AL353801.3-201ENST00000609898 542 ntBASIC21.06■□□□□ 0.96
COPB2P35606 AC083906.6-201ENST00000641366 219 ntBASIC21.06■□□□□ 0.96
COPB2P35606 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.06■□□□□ 0.96
COPB2P35606 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
COPB2P35606 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
COPB2P35606 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.06■□□□□ 0.96
COPB2P35606 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
COPB2P35606 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COPB2P35606 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
COPB2P35606 AL032819.2-201ENST00000624543 2162 ntBASIC21.05■□□□□ 0.96
COPB2P35606 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COPB2P35606 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPB2P35606 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPB2P35606 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
COPB2P35606 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
COPB2P35606 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPB2P35606 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
COPB2P35606 MIR149-201ENST00000384879 89 ntBASIC21.05■□□□□ 0.96
COPB2P35606 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.05■□□□□ 0.96
COPB2P35606 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COPB2P35606 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.05■□□□□ 0.96
COPB2P35606 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
COPB2P35606 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
COPB2P35606 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPB2P35606 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPB2P35606 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.05■□□□□ 0.96
COPB2P35606 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPB2P35606 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPB2P35606 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COPB2P35606 NSUN5P1-202ENST00000421140 1535 ntBASIC21.04■□□□□ 0.96
COPB2P35606 NSUN5P2-203ENST00000457352 1529 ntBASIC21.04■□□□□ 0.96
COPB2P35606 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COPB2P35606 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.04■□□□□ 0.96
COPB2P35606 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.04■□□□□ 0.96
COPB2P35606 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COPB2P35606 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
COPB2P35606 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.04■□□□□ 0.96
COPB2P35606 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COPB2P35606 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COPB2P35606 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COPB2P35606 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.04■□□□□ 0.96
COPB2P35606 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
COPB2P35606 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
COPB2P35606 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.04■□□□□ 0.96
COPB2P35606 AC113404.2-201ENST00000507884 177 ntBASIC21.04■□□□□ 0.96
COPB2P35606 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC21.04■□□□□ 0.96
COPB2P35606 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.04■□□□□ 0.96
COPB2P35606 AC106795.1-205ENST00000512851 1056 ntBASIC21.04■□□□□ 0.96
COPB2P35606 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COPB2P35606 AL662844.1-201ENST00000546340 181 ntBASIC21.04■□□□□ 0.96
COPB2P35606 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.04■□□□□ 0.96
COPB2P35606 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.04■□□□□ 0.96
COPB2P35606 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.04■□□□□ 0.96
COPB2P35606 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.04■□□□□ 0.96
COPB2P35606 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
COPB2P35606 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
COPB2P35606 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COPB2P35606 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.04■□□□□ 0.96
COPB2P35606 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.03■□□□□ 0.96
COPB2P35606 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COPB2P35606 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COPB2P35606 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COPB2P35606 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
COPB2P35606 POM121L3P-201ENST00000419331 1163 ntBASIC21.03■□□□□ 0.96
COPB2P35606 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.03■□□□□ 0.96
COPB2P35606 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.03■□□□□ 0.96
COPB2P35606 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COPB2P35606 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COPB2P35606 AL121912.1-201ENST00000603683 238 ntBASIC21.03■□□□□ 0.96
COPB2P35606 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COPB2P35606 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.03■□□□□ 0.96
COPB2P35606 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
COPB2P35606 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.03■□□□□ 0.96
COPB2P35606 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COPB2P35606 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COPB2P35606 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COPB2P35606 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COPB2P35606 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COPB2P35606 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COPB2P35606 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.02■□□□□ 0.96
COPB2P35606 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
COPB2P35606 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COPB2P35606 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COPB2P35606 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COPB2P35606 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COPB2P35606 AC079781.3-201ENST00000449110 356 ntBASIC21.02■□□□□ 0.96
COPB2P35606 AC009078.2-202ENST00000463353 338 ntBASIC21.02■□□□□ 0.96
COPB2P35606 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COPB2P35606 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COPB2P35606 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
COPB2P35606 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
COPB2P35606 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.02■□□□□ 0.96
COPB2P35606 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
COPB2P35606 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COPB2P35606 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COPB2P35606 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COPB2P35606 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.01■□□□□ 0.95
COPB2P35606 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COPB2P35606 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COPB2P35606 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms