Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AL645608.8-201ENST00000606034 2086 ntBASIC13.59□□□□□ -0.23
CKS2P33552 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CKS2P33552 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CKS2P33552 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
CKS2P33552 REXO1L9P-201ENST00000604264 2108 ntBASIC13.58□□□□□ -0.23
CKS2P33552 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
CKS2P33552 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
CKS2P33552 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.58□□□□□ -0.24
CKS2P33552 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC13.58□□□□□ -0.24
CKS2P33552 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.58□□□□□ -0.24
CKS2P33552 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
CKS2P33552 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.58□□□□□ -0.24
CKS2P33552 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.58□□□□□ -0.24
CKS2P33552 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
CKS2P33552 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CKS2P33552 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.58□□□□□ -0.24
CKS2P33552 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC13.58□□□□□ -0.24
CKS2P33552 AC080080.1-201ENST00000625121 2420 ntBASIC13.58□□□□□ -0.24
CKS2P33552 TNRC18P3-201ENST00000441896 2691 ntBASIC13.57□□□□□ -0.24
CKS2P33552 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC13.57□□□□□ -0.24
CKS2P33552 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.57□□□□□ -0.24
CKS2P33552 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.57□□□□□ -0.24
CKS2P33552 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CKS2P33552 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.57□□□□□ -0.24
CKS2P33552 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.57□□□□□ -0.24
CKS2P33552 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.57□□□□□ -0.24
CKS2P33552 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.57□□□□□ -0.24
CKS2P33552 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.57□□□□□ -0.24
CKS2P33552 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.57□□□□□ -0.24
CKS2P33552 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.57□□□□□ -0.24
CKS2P33552 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.57□□□□□ -0.24
CKS2P33552 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.57□□□□□ -0.24
CKS2P33552 AD000864.1-201ENST00000624076 2295 ntBASIC13.57□□□□□ -0.24
CKS2P33552 AC063926.3-201ENST00000624734 5658 ntBASIC13.57□□□□□ -0.24
CKS2P33552 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.57□□□□□ -0.24
CKS2P33552 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CKS2P33552 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CKS2P33552 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS2P33552 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CKS2P33552 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CKS2P33552 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.56□□□□□ -0.24
CKS2P33552 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CKS2P33552 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS2P33552 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS2P33552 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.56□□□□□ -0.24
CKS2P33552 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS2P33552 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS2P33552 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.56□□□□□ -0.24
CKS2P33552 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.56□□□□□ -0.24
CKS2P33552 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.56□□□□□ -0.24
CKS2P33552 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS2P33552 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CKS2P33552 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CKS2P33552 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CKS2P33552 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.56□□□□□ -0.24
CKS2P33552 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS2P33552 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CKS2P33552 GPX1P1-201ENST00000388829 606 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms