Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.14■□□□□ 0.49
VARSP26640 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
VARSP26640 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARSP26640 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.14■□□□□ 0.49
VARSP26640 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARSP26640 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARSP26640 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARSP26640 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARSP26640 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
VARSP26640 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.14■□□□□ 0.49
VARSP26640 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARSP26640 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VARSP26640 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VARSP26640 KRT8P32-201ENST00000512863 1461 ntBASIC18.14■□□□□ 0.49
VARSP26640 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARSP26640 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARSP26640 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARSP26640 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.13■□□□□ 0.49
VARSP26640 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARSP26640 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
VARSP26640 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARSP26640 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
VARSP26640 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARSP26640 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.13■□□□□ 0.49
VARSP26640 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
VARSP26640 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
VARSP26640 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.13■□□□□ 0.49
VARSP26640 AC068587.9-201ENST00000641814 219 ntBASIC18.13■□□□□ 0.49
VARSP26640 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VARSP26640 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
VARSP26640 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARSP26640 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.13■□□□□ 0.49
VARSP26640 AL354751.1-201ENST00000412768 1863 ntBASIC18.13■□□□□ 0.49
VARSP26640 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARSP26640 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
VARSP26640 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.13■□□□□ 0.49
VARSP26640 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.13■□□□□ 0.49
VARSP26640 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
VARSP26640 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
VARSP26640 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.13■□□□□ 0.49
VARSP26640 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
VARSP26640 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.13■□□□□ 0.49
VARSP26640 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.13■□□□□ 0.49
VARSP26640 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.13■□□□□ 0.49
VARSP26640 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARSP26640 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARSP26640 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VARSP26640 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.12■□□□□ 0.49
VARSP26640 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.12■□□□□ 0.49
VARSP26640 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.12■□□□□ 0.49
VARSP26640 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.12■□□□□ 0.49
VARSP26640 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
VARSP26640 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
VARSP26640 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.12■□□□□ 0.49
VARSP26640 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.12■□□□□ 0.49
VARSP26640 AP005242.2-201ENST00000580065 1175 ntBASIC18.12■□□□□ 0.49
VARSP26640 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.12■□□□□ 0.49
VARSP26640 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
VARSP26640 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.12■□□□□ 0.49
VARSP26640 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
VARSP26640 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
VARSP26640 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.12■□□□□ 0.49
VARSP26640 RCC2P3-201ENST00000418112 1537 ntBASIC18.12■□□□□ 0.49
VARSP26640 MTMR9LP-203ENST00000426597 1545 ntBASIC18.12■□□□□ 0.49
VARSP26640 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.12■□□□□ 0.49
VARSP26640 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.12■□□□□ 0.49
VARSP26640 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.12■□□□□ 0.49
VARSP26640 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
VARSP26640 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.12■□□□□ 0.49
VARSP26640 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
VARSP26640 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.12■□□□□ 0.49
VARSP26640 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VARSP26640 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.11■□□□□ 0.49
VARSP26640 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARSP26640 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARSP26640 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARSP26640 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
VARSP26640 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARSP26640 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
VARSP26640 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
VARSP26640 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VARSP26640 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms