Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 CREM-229ENST00000474362 1030 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB5AP20339 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB5AP20339 KRT8P17-201ENST00000453110 1448 ntBASIC14.37□□□□□ -0.11
RAB5AP20339 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5AP20339 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5AP20339 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5AP20339 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5AP20339 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RAB5AP20339 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5AP20339 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB5AP20339 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.37□□□□□ -0.11
RAB5AP20339 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RAB5AP20339 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5AP20339 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAB5AP20339 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RAB5AP20339 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB5AP20339 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.37□□□□□ -0.11
RAB5AP20339 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB5AP20339 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
RAB5AP20339 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAB5AP20339 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5AP20339 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5AP20339 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5AP20339 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5AP20339 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RAB5AP20339 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5AP20339 AC093677.2-201ENST00000600169 1863 ntBASIC14.36□□□□□ -0.11
RAB5AP20339 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5AP20339 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5AP20339 ZNF815P-204ENST00000434898 1737 ntBASIC14.36□□□□□ -0.11
RAB5AP20339 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB5AP20339 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5AP20339 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RAB5AP20339 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB5AP20339 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
RAB5AP20339 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5AP20339 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB5AP20339 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5AP20339 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5AP20339 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB5AP20339 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5AP20339 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5AP20339 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAB5AP20339 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5AP20339 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5AP20339 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5AP20339 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB5AP20339 AC005224.4-201ENST00000583262 1652 ntBASIC14.36□□□□□ -0.11
RAB5AP20339 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5AP20339 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB5AP20339 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5AP20339 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB5AP20339 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB5AP20339 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB5AP20339 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5AP20339 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RAB5AP20339 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RAB5AP20339 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB5AP20339 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5AP20339 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5AP20339 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5AP20339 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5AP20339 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
RAB5AP20339 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB5AP20339 MIR3621-201ENST00000580529 85 ntBASIC14.35□□□□□ -0.11
RAB5AP20339 AC053503.5-201ENST00000601508 636 ntBASIC14.35□□□□□ -0.11
RAB5AP20339 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.35□□□□□ -0.11
RAB5AP20339 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5AP20339 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5AP20339 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5AP20339 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB5AP20339 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB5AP20339 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5AP20339 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB5AP20339 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB5AP20339 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB5AP20339 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
RAB5AP20339 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB5AP20339 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB5AP20339 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB5AP20339 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB5AP20339 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB5AP20339 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.34□□□□□ -0.11
RAB5AP20339 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB5AP20339 REXO1L9P-201ENST00000604264 2108 ntBASIC14.34□□□□□ -0.11
RAB5AP20339 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB5AP20339 AC008175.2-201ENST00000612840 297 ntBASIC14.34□□□□□ -0.11
RAB5AP20339 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms