Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 LINC01568-207ENST00000641790 1380 ntBASIC21.25■□□□□ 0.99
ATP2B1P20020 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP2B1P20020 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP2B1P20020 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B1P20020 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.25■□□□□ 0.99
ATP2B1P20020 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B1P20020 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B1P20020 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
ATP2B1P20020 KRT8P45-201ENST00000414328 1447 ntBASIC21.25■□□□□ 0.99
ATP2B1P20020 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.25■□□□□ 0.99
ATP2B1P20020 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B1P20020 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.25■□□□□ 0.99
ATP2B1P20020 CR769767.2-201ENST00000622735 460 ntBASIC21.25■□□□□ 0.99
ATP2B1P20020 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.25■□□□□ 0.99
ATP2B1P20020 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B1P20020 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ATP2B1P20020 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
ATP2B1P20020 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ATP2B1P20020 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ATP2B1P20020 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ATP2B1P20020 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B1P20020 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B1P20020 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B1P20020 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B1P20020 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.24■□□□□ 0.99
ATP2B1P20020 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B1P20020 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.24■□□□□ 0.99
ATP2B1P20020 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B1P20020 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP2B1P20020 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP2B1P20020 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP2B1P20020 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP2B1P20020 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.24■□□□□ 0.99
ATP2B1P20020 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B1P20020 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B1P20020 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B1P20020 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.24■□□□□ 0.99
ATP2B1P20020 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B1P20020 AC018470.1-201ENST00000624790 3129 ntBASIC21.24■□□□□ 0.99
ATP2B1P20020 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B1P20020 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ATP2B1P20020 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ATP2B1P20020 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ATP2B1P20020 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B1P20020 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.23■□□□□ 0.99
ATP2B1P20020 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP2B1P20020 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
ATP2B1P20020 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
ATP2B1P20020 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.23■□□□□ 0.99
ATP2B1P20020 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B1P20020 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.23■□□□□ 0.99
ATP2B1P20020 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B1P20020 AC128688.1-201ENST00000487626 519 ntBASIC21.23■□□□□ 0.99
ATP2B1P20020 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.23■□□□□ 0.99
ATP2B1P20020 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.23■□□□□ 0.99
ATP2B1P20020 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B1P20020 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.23■□□□□ 0.99
ATP2B1P20020 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B1P20020 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B1P20020 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B1P20020 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ATP2B1P20020 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B1P20020 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP2B1P20020 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.22■□□□□ 0.99
ATP2B1P20020 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B1P20020 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B1P20020 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B1P20020 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP2B1P20020 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP2B1P20020 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B1P20020 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
ATP2B1P20020 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B1P20020 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP2B1P20020 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
ATP2B1P20020 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B1P20020 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.22■□□□□ 0.99
ATP2B1P20020 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP2B1P20020 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B1P20020 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.22■□□□□ 0.99
ATP2B1P20020 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B1P20020 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ATP2B1P20020 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B1P20020 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B1P20020 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ATP2B1P20020 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ATP2B1P20020 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
ATP2B1P20020 AC112777.1-201ENST00000540175 1423 ntBASIC21.21■□□□□ 0.99
ATP2B1P20020 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B1P20020 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B1P20020 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
ATP2B1P20020 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B1P20020 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B1P20020 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B1P20020 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC21.21■□□□□ 0.99
ATP2B1P20020 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.21■□□□□ 0.99
ATP2B1P20020 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ATP2B1P20020 FAM87A-204ENST00000613235 858 ntBASIC21.21■□□□□ 0.99
ATP2B1P20020 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
ATP2B1P20020 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ATP2B1P20020 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms