Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6GP18545 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC11.43□□□□□ -0.58
PDE6GP18545 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6GP18545 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
PDE6GP18545 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6GP18545 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
PDE6GP18545 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
PDE6GP18545 AP001094.4-201ENST00000579008 2176 ntBASIC11.43□□□□□ -0.58
PDE6GP18545 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
PDE6GP18545 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
PDE6GP18545 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
PDE6GP18545 NORAD-201ENST00000565493 5339 ntBASIC11.42□□□□□ -0.58
PDE6GP18545 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC11.42□□□□□ -0.58
PDE6GP18545 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
PDE6GP18545 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
PDE6GP18545 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC11.42□□□□□ -0.58
PDE6GP18545 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
PDE6GP18545 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC11.42□□□□□ -0.58
PDE6GP18545 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC11.42□□□□□ -0.58
PDE6GP18545 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
PDE6GP18545 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC11.42□□□□□ -0.58
PDE6GP18545 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC11.42□□□□□ -0.58
PDE6GP18545 MFSD11-216ENST00000590393 1141 ntBASIC11.42□□□□□ -0.58
PDE6GP18545 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
PDE6GP18545 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC11.42□□□□□ -0.58
PDE6GP18545 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
PDE6GP18545 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
PDE6GP18545 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC11.42□□□□□ -0.58
PDE6GP18545 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
PDE6GP18545 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
PDE6GP18545 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
PDE6GP18545 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
PDE6GP18545 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
PDE6GP18545 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC11.42□□□□□ -0.58
PDE6GP18545 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
PDE6GP18545 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.42□□□□□ -0.58
PDE6GP18545 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC11.42□□□□□ -0.58
PDE6GP18545 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
PDE6GP18545 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
PDE6GP18545 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC11.42□□□□□ -0.58
PDE6GP18545 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC11.41□□□□□ -0.58
PDE6GP18545 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC11.41□□□□□ -0.58
PDE6GP18545 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC11.41□□□□□ -0.58
PDE6GP18545 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC11.41□□□□□ -0.58
PDE6GP18545 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC11.41□□□□□ -0.58
PDE6GP18545 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC11.41□□□□□ -0.58
PDE6GP18545 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC11.41□□□□□ -0.58
PDE6GP18545 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC11.41□□□□□ -0.58
PDE6GP18545 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
PDE6GP18545 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC11.41□□□□□ -0.58
PDE6GP18545 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC11.41□□□□□ -0.58
PDE6GP18545 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC11.41□□□□□ -0.58
PDE6GP18545 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
PDE6GP18545 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC11.41□□□□□ -0.58
PDE6GP18545 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC11.41□□□□□ -0.58
PDE6GP18545 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC11.41□□□□□ -0.58
PDE6GP18545 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC11.41□□□□□ -0.58
PDE6GP18545 MPST-208ENST00000628507 698 ntTSL 5 BASIC11.41□□□□□ -0.58
PDE6GP18545 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
PDE6GP18545 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
PDE6GP18545 NF2-208ENST00000403435 2568 ntTSL 5 BASIC11.41□□□□□ -0.58
PDE6GP18545 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms