Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.56■□□□□ 0.56
VCLP18206 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VCLP18206 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCLP18206 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCLP18206 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
VCLP18206 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCLP18206 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCLP18206 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.55■□□□□ 0.56
VCLP18206 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.55■□□□□ 0.56
VCLP18206 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCLP18206 TERF1P1-201ENST00000311003 1181 ntBASIC18.55■□□□□ 0.56
VCLP18206 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCLP18206 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
VCLP18206 AC005521.1-201ENST00000393351 872 ntBASIC18.55■□□□□ 0.56
VCLP18206 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCLP18206 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.55■□□□□ 0.56
VCLP18206 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.55■□□□□ 0.56
VCLP18206 KRT18P21-201ENST00000515767 1272 ntBASIC18.55■□□□□ 0.56
VCLP18206 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.55■□□□□ 0.56
VCLP18206 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.55■□□□□ 0.56
VCLP18206 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.55■□□□□ 0.56
VCLP18206 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VCLP18206 AC083906.6-201ENST00000641366 219 ntBASIC18.55■□□□□ 0.56
VCLP18206 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
VCLP18206 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCLP18206 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
VCLP18206 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.55■□□□□ 0.56
VCLP18206 AC093525.10-201ENST00000625130 1569 ntBASIC18.55■□□□□ 0.56
VCLP18206 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
VCLP18206 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCLP18206 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCLP18206 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VCLP18206 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VCLP18206 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCLP18206 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.54■□□□□ 0.56
VCLP18206 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
VCLP18206 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
VCLP18206 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCLP18206 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.54■□□□□ 0.56
VCLP18206 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCLP18206 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCLP18206 BICD1-207ENST00000551848 1962 ntBASIC18.54■□□□□ 0.56
VCLP18206 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VCLP18206 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCLP18206 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VCLP18206 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
VCLP18206 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCLP18206 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCLP18206 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
VCLP18206 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.54■□□□□ 0.56
VCLP18206 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
VCLP18206 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCLP18206 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCLP18206 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.54■□□□□ 0.56
VCLP18206 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCLP18206 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
VCLP18206 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VCLP18206 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
VCLP18206 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.54■□□□□ 0.56
VCLP18206 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
VCLP18206 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
VCLP18206 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VCLP18206 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
VCLP18206 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCLP18206 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCLP18206 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCLP18206 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.53■□□□□ 0.56
VCLP18206 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCLP18206 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCLP18206 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCLP18206 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCLP18206 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCLP18206 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VCLP18206 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.53■□□□□ 0.56
VCLP18206 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCLP18206 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VCLP18206 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
VCLP18206 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.53■□□□□ 0.56
VCLP18206 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
VCLP18206 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VCLP18206 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.53■□□□□ 0.56
VCLP18206 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
VCLP18206 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VCLP18206 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.53■□□□□ 0.56
VCLP18206 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
VCLP18206 AL031598.1-201ENST00000561511 1773 ntBASIC18.53■□□□□ 0.56
VCLP18206 Z98044.1-201ENST00000632503 1764 ntBASIC18.53■□□□□ 0.56
VCLP18206 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VCLP18206 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
VCLP18206 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VCLP18206 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VCLP18206 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VCLP18206 AL354751.1-201ENST00000412768 1863 ntBASIC18.52■□□□□ 0.56
VCLP18206 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VCLP18206 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
VCLP18206 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
VCLP18206 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.52■□□□□ 0.56
VCLP18206 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
VCLP18206 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
VCLP18206 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms