Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC22.51■■□□□ 1.19
COL11A2P13942 AC009533.2-201ENST00000543664 586 ntBASIC22.51■■□□□ 1.19
COL11A2P13942 AC040169.1-201ENST00000565382 521 ntBASIC22.51■■□□□ 1.19
COL11A2P13942 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
COL11A2P13942 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL11A2P13942 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL11A2P13942 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL11A2P13942 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL11A2P13942 AC009102.3-201ENST00000623118 1491 ntBASIC22.5■■□□□ 1.19
COL11A2P13942 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL11A2P13942 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL11A2P13942 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL11A2P13942 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
COL11A2P13942 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL11A2P13942 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL11A2P13942 AC004832.2-201ENST00000426397 482 ntBASIC22.5■■□□□ 1.19
COL11A2P13942 ALG1L5P-201ENST00000482043 771 ntBASIC22.5■■□□□ 1.19
COL11A2P13942 DHDH-204ENST00000523250 634 ntTSL 5 BASIC22.5■■□□□ 1.19
COL11A2P13942 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC22.5■■□□□ 1.19
COL11A2P13942 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC22.5■■□□□ 1.19
COL11A2P13942 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL11A2P13942 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL11A2P13942 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL11A2P13942 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL11A2P13942 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COL11A2P13942 AC022898.2-201ENST00000616822 1312 ntBASIC22.5■■□□□ 1.19
COL11A2P13942 HLA-J-201ENST00000462773 1622 ntBASIC22.5■■□□□ 1.19
COL11A2P13942 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL11A2P13942 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL11A2P13942 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL11A2P13942 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL11A2P13942 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL11A2P13942 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL11A2P13942 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL11A2P13942 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
COL11A2P13942 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC22.49■■□□□ 1.19
COL11A2P13942 DANCR-204ENST00000444958 709 ntTSL 3 BASIC22.49■■□□□ 1.19
COL11A2P13942 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL11A2P13942 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC22.49■■□□□ 1.19
COL11A2P13942 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL11A2P13942 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
COL11A2P13942 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL11A2P13942 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL11A2P13942 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL11A2P13942 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL11A2P13942 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL11A2P13942 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC22.48■■□□□ 1.19
COL11A2P13942 DNAJB3-202ENST00000449667 1266 ntBASIC22.48■■□□□ 1.19
COL11A2P13942 AC068472.1-201ENST00000474589 881 ntBASIC22.48■■□□□ 1.19
COL11A2P13942 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC22.48■■□□□ 1.19
COL11A2P13942 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC22.48■■□□□ 1.19
COL11A2P13942 RNF151-202ENST00000569210 853 ntTSL 2 BASIC22.48■■□□□ 1.19
COL11A2P13942 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL11A2P13942 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL11A2P13942 ASL-204ENST00000395331 1538 ntTSL 5 BASIC22.48■■□□□ 1.19
COL11A2P13942 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL11A2P13942 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL11A2P13942 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
COL11A2P13942 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL11A2P13942 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL11A2P13942 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
COL11A2P13942 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL11A2P13942 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC22.48■■□□□ 1.19
COL11A2P13942 MTDHP4-201ENST00000600287 670 ntBASIC22.48■■□□□ 1.19
COL11A2P13942 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL11A2P13942 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
COL11A2P13942 AL356309.3-201ENST00000624132 1934 ntBASIC22.48■■□□□ 1.19
COL11A2P13942 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL11A2P13942 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
COL11A2P13942 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL11A2P13942 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
COL11A2P13942 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL11A2P13942 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL11A2P13942 CENPM-204ENST00000402420 688 ntTSL 5 BASIC22.47■■□□□ 1.19
COL11A2P13942 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL11A2P13942 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC22.47■■□□□ 1.19
COL11A2P13942 AC009154.2-201ENST00000621177 724 ntBASIC22.47■■□□□ 1.19
COL11A2P13942 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.47■■□□□ 1.19
COL11A2P13942 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL11A2P13942 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC22.47■■□□□ 1.19
COL11A2P13942 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.47■■□□□ 1.19
COL11A2P13942 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC22.46■■□□□ 1.19
COL11A2P13942 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL11A2P13942 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.46■■□□□ 1.19
COL11A2P13942 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL11A2P13942 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL11A2P13942 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL11A2P13942 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.46■■□□□ 1.19
COL11A2P13942 RPS8P6-201ENST00000426177 609 ntBASIC22.46■■□□□ 1.19
COL11A2P13942 KRT18P3-201ENST00000451602 1288 ntBASIC22.46■■□□□ 1.19
COL11A2P13942 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC22.46■■□□□ 1.19
COL11A2P13942 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC22.46■■□□□ 1.19
COL11A2P13942 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL11A2P13942 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL11A2P13942 AL158211.5-201ENST00000623583 2518 ntBASIC22.46■■□□□ 1.19
COL11A2P13942 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
COL11A2P13942 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.46■■□□□ 1.19
COL11A2P13942 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.46■■□□□ 1.19
COL11A2P13942 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC22.46■■□□□ 1.19
COL11A2P13942 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms