Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBL4AP11441 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.06■□□□□ 0.32
UBL4AP11441 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBL4AP11441 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
UBL4AP11441 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBL4AP11441 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
UBL4AP11441 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBL4AP11441 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBL4AP11441 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBL4AP11441 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.06■□□□□ 0.32
UBL4AP11441 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.06■□□□□ 0.32
UBL4AP11441 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBL4AP11441 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.06■□□□□ 0.32
UBL4AP11441 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.06■□□□□ 0.32
UBL4AP11441 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
UBL4AP11441 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.06■□□□□ 0.32
UBL4AP11441 AC010947.1-201ENST00000623454 693 ntBASIC17.06■□□□□ 0.32
UBL4AP11441 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBL4AP11441 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBL4AP11441 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBL4AP11441 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
UBL4AP11441 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
UBL4AP11441 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBL4AP11441 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBL4AP11441 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.06■□□□□ 0.32
UBL4AP11441 AC126763.1-201ENST00000552015 2118 ntBASIC17.06■□□□□ 0.32
UBL4AP11441 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBL4AP11441 AC034236.2-201ENST00000606662 1610 ntBASIC17.06■□□□□ 0.32
UBL4AP11441 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBL4AP11441 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
UBL4AP11441 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
UBL4AP11441 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
UBL4AP11441 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.06■□□□□ 0.32
UBL4AP11441 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.05■□□□□ 0.32
UBL4AP11441 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.05■□□□□ 0.32
UBL4AP11441 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 AC090164.3-201ENST00000610780 2143 ntBASIC17.05■□□□□ 0.32
UBL4AP11441 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.05■□□□□ 0.32
UBL4AP11441 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
UBL4AP11441 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
UBL4AP11441 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBL4AP11441 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.05■□□□□ 0.32
UBL4AP11441 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.05■□□□□ 0.32
UBL4AP11441 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.05■□□□□ 0.32
UBL4AP11441 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.05■□□□□ 0.32
UBL4AP11441 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.05■□□□□ 0.32
UBL4AP11441 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.05■□□□□ 0.32
UBL4AP11441 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBL4AP11441 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBL4AP11441 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBL4AP11441 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.04■□□□□ 0.32
UBL4AP11441 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBL4AP11441 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBL4AP11441 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBL4AP11441 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBL4AP11441 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
UBL4AP11441 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
UBL4AP11441 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBL4AP11441 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBL4AP11441 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.04■□□□□ 0.32
UBL4AP11441 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.04■□□□□ 0.32
UBL4AP11441 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.04■□□□□ 0.32
UBL4AP11441 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.04■□□□□ 0.32
UBL4AP11441 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.04■□□□□ 0.32
UBL4AP11441 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.04■□□□□ 0.32
UBL4AP11441 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
UBL4AP11441 AC073592.3-201ENST00000625118 1834 ntBASIC17.04■□□□□ 0.32
UBL4AP11441 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBL4AP11441 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBL4AP11441 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBL4AP11441 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.04■□□□□ 0.32
UBL4AP11441 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UBL4AP11441 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBL4AP11441 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBL4AP11441 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBL4AP11441 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
UBL4AP11441 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms