Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.99■□□□□ 0.31
THBS1P07996 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
THBS1P07996 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.99■□□□□ 0.31
THBS1P07996 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.99■□□□□ 0.31
THBS1P07996 CR769767.2-201ENST00000622735 460 ntBASIC16.99■□□□□ 0.31
THBS1P07996 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
THBS1P07996 AL163051.1-201ENST00000569214 1512 ntBASIC16.99■□□□□ 0.31
THBS1P07996 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
THBS1P07996 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
THBS1P07996 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.99■□□□□ 0.31
THBS1P07996 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
THBS1P07996 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
THBS1P07996 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
THBS1P07996 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.99■□□□□ 0.31
THBS1P07996 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.99■□□□□ 0.31
THBS1P07996 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
THBS1P07996 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
THBS1P07996 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
THBS1P07996 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THBS1P07996 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
THBS1P07996 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
THBS1P07996 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
THBS1P07996 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
THBS1P07996 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THBS1P07996 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.98■□□□□ 0.31
THBS1P07996 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
THBS1P07996 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THBS1P07996 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THBS1P07996 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
THBS1P07996 MIR1224-201ENST00000408193 85 ntBASIC16.98■□□□□ 0.31
THBS1P07996 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.98■□□□□ 0.31
THBS1P07996 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.98■□□□□ 0.31
THBS1P07996 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.98■□□□□ 0.31
THBS1P07996 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.98■□□□□ 0.31
THBS1P07996 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.98■□□□□ 0.31
THBS1P07996 AC010653.2-201ENST00000623505 997 ntBASIC16.98■□□□□ 0.31
THBS1P07996 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
THBS1P07996 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
THBS1P07996 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
THBS1P07996 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
THBS1P07996 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
THBS1P07996 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.98■□□□□ 0.31
THBS1P07996 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
THBS1P07996 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
THBS1P07996 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.98■□□□□ 0.31
THBS1P07996 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.98■□□□□ 0.31
THBS1P07996 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.98■□□□□ 0.31
THBS1P07996 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
THBS1P07996 AC009102.3-201ENST00000623118 1491 ntBASIC16.98■□□□□ 0.31
THBS1P07996 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THBS1P07996 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THBS1P07996 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THBS1P07996 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
THBS1P07996 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
THBS1P07996 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
THBS1P07996 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.97■□□□□ 0.31
THBS1P07996 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
THBS1P07996 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
THBS1P07996 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.97■□□□□ 0.31
THBS1P07996 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
THBS1P07996 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
THBS1P07996 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
THBS1P07996 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
THBS1P07996 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
THBS1P07996 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.97■□□□□ 0.31
THBS1P07996 MIR1238-201ENST00000408483 83 ntBASIC16.97■□□□□ 0.31
THBS1P07996 KRT18P23-201ENST00000435622 1283 ntBASIC16.97■□□□□ 0.31
THBS1P07996 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
THBS1P07996 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
THBS1P07996 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.97■□□□□ 0.31
THBS1P07996 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.97■□□□□ 0.31
THBS1P07996 AC009065.1-201ENST00000564055 1225 ntBASIC16.97■□□□□ 0.31
THBS1P07996 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.97■□□□□ 0.31
THBS1P07996 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.97■□□□□ 0.31
THBS1P07996 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
THBS1P07996 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.97■□□□□ 0.31
THBS1P07996 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.97■□□□□ 0.31
THBS1P07996 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
THBS1P07996 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
THBS1P07996 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
THBS1P07996 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
THBS1P07996 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
THBS1P07996 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
THBS1P07996 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.97■□□□□ 0.31
THBS1P07996 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.97■□□□□ 0.31
THBS1P07996 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
THBS1P07996 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
THBS1P07996 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
THBS1P07996 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.96■□□□□ 0.31
THBS1P07996 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
THBS1P07996 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.96■□□□□ 0.31
THBS1P07996 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.96■□□□□ 0.31
THBS1P07996 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
THBS1P07996 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
THBS1P07996 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
THBS1P07996 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
THBS1P07996 TSPY14P-201ENST00000303979 915 ntBASIC16.96■□□□□ 0.31
THBS1P07996 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
THBS1P07996 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
THBS1P07996 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms