Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-CO1P00395 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
MT-CO1P00395 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.91■□□□□ 0.62
MT-CO1P00395 AC104390.1-201ENST00000555663 520 ntBASIC18.91■□□□□ 0.62
MT-CO1P00395 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-CO1P00395 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
MT-CO1P00395 AL157888.1-201ENST00000631930 593 ntBASIC18.91■□□□□ 0.62
MT-CO1P00395 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-CO1P00395 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-CO1P00395 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
MT-CO1P00395 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-CO1P00395 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-CO1P00395 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.91■□□□□ 0.62
MT-CO1P00395 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.91■□□□□ 0.62
MT-CO1P00395 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-CO1P00395 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
MT-CO1P00395 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
MT-CO1P00395 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
MT-CO1P00395 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.9■□□□□ 0.62
MT-CO1P00395 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MT-CO1P00395 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-CO1P00395 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-CO1P00395 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-CO1P00395 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-CO1P00395 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-CO1P00395 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.9■□□□□ 0.62
MT-CO1P00395 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.9■□□□□ 0.62
MT-CO1P00395 AC083849.1-201ENST00000615227 514 ntBASIC18.9■□□□□ 0.62
MT-CO1P00395 AL358472.4-201ENST00000633140 710 ntBASIC18.9■□□□□ 0.62
MT-CO1P00395 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-CO1P00395 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.9■□□□□ 0.62
MT-CO1P00395 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
MT-CO1P00395 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-CO1P00395 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-CO1P00395 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
MT-CO1P00395 KRT8P7-201ENST00000533003 1432 ntBASIC18.9■□□□□ 0.62
MT-CO1P00395 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-CO1P00395 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-CO1P00395 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-CO1P00395 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-CO1P00395 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-CO1P00395 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-CO1P00395 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
MT-CO1P00395 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
MT-CO1P00395 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
MT-CO1P00395 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MT-CO1P00395 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
MT-CO1P00395 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-CO1P00395 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.89■□□□□ 0.61
MT-CO1P00395 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MT-CO1P00395 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
MT-CO1P00395 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MT-CO1P00395 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
MT-CO1P00395 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.89■□□□□ 0.61
MT-CO1P00395 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.89■□□□□ 0.61
MT-CO1P00395 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-CO1P00395 FAM86EP-206ENST00000510506 987 ntBASIC18.89■□□□□ 0.61
MT-CO1P00395 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.89■□□□□ 0.61
MT-CO1P00395 MIR3917-201ENST00000580971 93 ntBASIC18.89■□□□□ 0.61
MT-CO1P00395 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.89■□□□□ 0.61
MT-CO1P00395 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.89■□□□□ 0.61
MT-CO1P00395 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.89■□□□□ 0.61
MT-CO1P00395 AC079602.3-201ENST00000623931 403 ntBASIC18.89■□□□□ 0.61
MT-CO1P00395 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-CO1P00395 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-CO1P00395 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-CO1P00395 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
MT-CO1P00395 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.89■□□□□ 0.61
MT-CO1P00395 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
MT-CO1P00395 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-CO1P00395 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-CO1P00395 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-CO1P00395 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-CO1P00395 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
MT-CO1P00395 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-CO1P00395 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
MT-CO1P00395 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
MT-CO1P00395 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.88■□□□□ 0.61
MT-CO1P00395 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
MT-CO1P00395 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.88■□□□□ 0.61
MT-CO1P00395 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.88■□□□□ 0.61
MT-CO1P00395 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.88■□□□□ 0.61
MT-CO1P00395 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO1P00395 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO1P00395 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
MT-CO1P00395 AC099343.3-201ENST00000605834 2503 ntBASIC18.88■□□□□ 0.61
MT-CO1P00395 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO1P00395 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO1P00395 AC034232.1-201ENST00000506026 1064 ntBASIC18.88■□□□□ 0.61
MT-CO1P00395 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.88■□□□□ 0.61
MT-CO1P00395 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.88■□□□□ 0.61
MT-CO1P00395 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO1P00395 AC010240.3-201ENST00000607688 395 ntBASIC18.88■□□□□ 0.61
MT-CO1P00395 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.88■□□□□ 0.61
MT-CO1P00395 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO1P00395 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO1P00395 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.88■□□□□ 0.61
MT-CO1P00395 LINC01311-201ENST00000565162 1445 ntBASIC18.88■□□□□ 0.61
MT-CO1P00395 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MT-CO1P00395 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms