Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRUB2O95900 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.34■□□□□ 0.69
TRUB2O95900 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRUB2O95900 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TRUB2O95900 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRUB2O95900 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TRUB2O95900 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.34■□□□□ 0.69
TRUB2O95900 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.34■□□□□ 0.69
TRUB2O95900 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.34■□□□□ 0.69
TRUB2O95900 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRUB2O95900 KRT8P50-201ENST00000562022 1438 ntBASIC19.34■□□□□ 0.69
TRUB2O95900 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.34■□□□□ 0.69
TRUB2O95900 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRUB2O95900 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRUB2O95900 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRUB2O95900 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRUB2O95900 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRUB2O95900 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.33■□□□□ 0.69
TRUB2O95900 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TRUB2O95900 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.33■□□□□ 0.68
TRUB2O95900 AC104390.1-201ENST00000555663 520 ntBASIC19.33■□□□□ 0.68
TRUB2O95900 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.33■□□□□ 0.68
TRUB2O95900 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TRUB2O95900 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
TRUB2O95900 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.33■□□□□ 0.68
TRUB2O95900 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRUB2O95900 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRUB2O95900 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.33■□□□□ 0.68
TRUB2O95900 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRUB2O95900 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRUB2O95900 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRUB2O95900 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.33■□□□□ 0.68
TRUB2O95900 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRUB2O95900 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRUB2O95900 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.33■□□□□ 0.68
TRUB2O95900 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRUB2O95900 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRUB2O95900 AL354751.1-201ENST00000412768 1863 ntBASIC19.33■□□□□ 0.68
TRUB2O95900 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRUB2O95900 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.32■□□□□ 0.68
TRUB2O95900 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.32■□□□□ 0.68
TRUB2O95900 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.32■□□□□ 0.68
TRUB2O95900 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
TRUB2O95900 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TRUB2O95900 AP000593.1-201ENST00000393668 712 ntBASIC19.32■□□□□ 0.68
TRUB2O95900 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.32■□□□□ 0.68
TRUB2O95900 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.32■□□□□ 0.68
TRUB2O95900 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.32■□□□□ 0.68
TRUB2O95900 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.32■□□□□ 0.68
TRUB2O95900 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 AL390961.4-201ENST00000623958 2535 ntBASIC19.32■□□□□ 0.68
TRUB2O95900 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.32■□□□□ 0.68
TRUB2O95900 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
TRUB2O95900 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.32■□□□□ 0.68
TRUB2O95900 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TRUB2O95900 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB2O95900 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRUB2O95900 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRUB2O95900 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRUB2O95900 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRUB2O95900 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRUB2O95900 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TRUB2O95900 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRUB2O95900 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
TRUB2O95900 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRUB2O95900 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRUB2O95900 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.31■□□□□ 0.68
TRUB2O95900 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.31■□□□□ 0.68
TRUB2O95900 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.31■□□□□ 0.68
TRUB2O95900 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.31■□□□□ 0.68
TRUB2O95900 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.31■□□□□ 0.68
TRUB2O95900 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TRUB2O95900 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.31■□□□□ 0.68
TRUB2O95900 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRUB2O95900 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRUB2O95900 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRUB2O95900 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
TRUB2O95900 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.31■□□□□ 0.68
TRUB2O95900 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRUB2O95900 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRUB2O95900 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.31■□□□□ 0.68
TRUB2O95900 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TRUB2O95900 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms