Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN11O75508 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN11O75508 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN11O75508 KRT89P-201ENST00000620027 1478 ntBASIC18.82■□□□□ 0.6
CLDN11O75508 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN11O75508 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN11O75508 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN11O75508 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN11O75508 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN11O75508 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLDN11O75508 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CLDN11O75508 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLDN11O75508 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN11O75508 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.81■□□□□ 0.6
CLDN11O75508 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN11O75508 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CLDN11O75508 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CLDN11O75508 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN11O75508 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN11O75508 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN11O75508 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN11O75508 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN11O75508 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.81■□□□□ 0.6
CLDN11O75508 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.81■□□□□ 0.6
CLDN11O75508 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN11O75508 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN11O75508 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.81■□□□□ 0.6
CLDN11O75508 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLDN11O75508 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.81■□□□□ 0.6
CLDN11O75508 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN11O75508 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN11O75508 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN11O75508 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN11O75508 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLDN11O75508 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.8■□□□□ 0.6
CLDN11O75508 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN11O75508 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLDN11O75508 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN11O75508 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN11O75508 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN11O75508 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN11O75508 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CLDN11O75508 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN11O75508 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN11O75508 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN11O75508 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN11O75508 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.8■□□□□ 0.6
CLDN11O75508 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLDN11O75508 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.8■□□□□ 0.6
CLDN11O75508 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN11O75508 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN11O75508 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.8■□□□□ 0.6
CLDN11O75508 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN11O75508 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN11O75508 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN11O75508 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLDN11O75508 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 AL138781.2-201ENST00000617896 1843 ntBASIC18.79■□□□□ 0.6
CLDN11O75508 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
CLDN11O75508 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN11O75508 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 AC005082.1-201ENST00000413042 2259 ntBASIC18.79■□□□□ 0.6
CLDN11O75508 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLDN11O75508 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN11O75508 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN11O75508 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN11O75508 AP003733.1-201ENST00000491725 852 ntBASIC18.79■□□□□ 0.6
CLDN11O75508 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.79■□□□□ 0.6
CLDN11O75508 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CLDN11O75508 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.79■□□□□ 0.6
CLDN11O75508 AC011498.5-201ENST00000592027 486 ntBASIC18.79■□□□□ 0.6
CLDN11O75508 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.79■□□□□ 0.6
CLDN11O75508 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 AC099343.3-201ENST00000605834 2503 ntBASIC18.79■□□□□ 0.6
CLDN11O75508 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN11O75508 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN11O75508 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN11O75508 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN11O75508 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN11O75508 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN11O75508 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN11O75508 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN11O75508 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN11O75508 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms