Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM13O60858 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM13O60858 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM13O60858 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM13O60858 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM13O60858 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM13O60858 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM13O60858 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM13O60858 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM13O60858 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRIM13O60858 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM13O60858 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM13O60858 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM13O60858 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM13O60858 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRIM13O60858 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM13O60858 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM13O60858 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRIM13O60858 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM13O60858 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM13O60858 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM13O60858 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM13O60858 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM13O60858 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TRIM13O60858 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM13O60858 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM13O60858 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM13O60858 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM13O60858 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRIM13O60858 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM13O60858 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM13O60858 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM13O60858 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM13O60858 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM13O60858 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM13O60858 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM13O60858 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM13O60858 AC011298.2-201ENST00000617989 482 ntBASIC18.18■□□□□ 0.5
TRIM13O60858 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM13O60858 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM13O60858 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM13O60858 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM13O60858 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM13O60858 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM13O60858 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM13O60858 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM13O60858 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM13O60858 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM13O60858 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM13O60858 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM13O60858 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM13O60858 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TRIM13O60858 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM13O60858 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM13O60858 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM13O60858 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM13O60858 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRIM13O60858 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM13O60858 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM13O60858 AP000593.1-201ENST00000393668 712 ntBASIC18.17■□□□□ 0.5
TRIM13O60858 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM13O60858 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM13O60858 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM13O60858 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM13O60858 RN7SL471P-201ENST00000580476 299 ntBASIC18.17■□□□□ 0.5
TRIM13O60858 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRIM13O60858 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM13O60858 AC130371.2-201ENST00000619443 611 ntBASIC18.17■□□□□ 0.5
TRIM13O60858 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM13O60858 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM13O60858 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRIM13O60858 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM13O60858 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRIM13O60858 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM13O60858 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM13O60858 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM13O60858 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TRIM13O60858 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM13O60858 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM13O60858 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TRIM13O60858 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM13O60858 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRIM13O60858 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRIM13O60858 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM13O60858 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM13O60858 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM13O60858 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM13O60858 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM13O60858 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM13O60858 KRT16P1-201ENST00000399124 1418 ntBASIC18.16■□□□□ 0.5
TRIM13O60858 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRIM13O60858 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM13O60858 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM13O60858 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM13O60858 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM13O60858 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM13O60858 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM13O60858 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM13O60858 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TRIM13O60858 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms