Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ZIC3O60481 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.57■□□□□ 0.24
ZIC3O60481 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.57■□□□□ 0.24
ZIC3O60481 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.57■□□□□ 0.24
ZIC3O60481 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ZIC3O60481 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.57■□□□□ 0.24
ZIC3O60481 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.57■□□□□ 0.24
ZIC3O60481 RNF126P1-202ENST00000569893 925 ntBASIC16.57■□□□□ 0.24
ZIC3O60481 AC011498.5-201ENST00000592027 486 ntBASIC16.57■□□□□ 0.24
ZIC3O60481 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.57■□□□□ 0.24
ZIC3O60481 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.57■□□□□ 0.24
ZIC3O60481 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
ZIC3O60481 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.57■□□□□ 0.24
ZIC3O60481 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.57■□□□□ 0.24
ZIC3O60481 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.57■□□□□ 0.24
ZIC3O60481 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.56■□□□□ 0.24
ZIC3O60481 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZIC3O60481 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.56■□□□□ 0.24
ZIC3O60481 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.56■□□□□ 0.24
ZIC3O60481 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZIC3O60481 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZIC3O60481 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZIC3O60481 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.56■□□□□ 0.24
ZIC3O60481 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ZIC3O60481 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZIC3O60481 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZIC3O60481 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZIC3O60481 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZIC3O60481 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.56■□□□□ 0.24
ZIC3O60481 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZIC3O60481 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZIC3O60481 KRT18P48-201ENST00000434763 852 ntBASIC16.56■□□□□ 0.24
ZIC3O60481 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.56■□□□□ 0.24
ZIC3O60481 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.56■□□□□ 0.24
ZIC3O60481 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
ZIC3O60481 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.56■□□□□ 0.24
ZIC3O60481 AL024508.2-201ENST00000607749 1894 ntBASIC16.56■□□□□ 0.24
ZIC3O60481 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZIC3O60481 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZIC3O60481 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZIC3O60481 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZIC3O60481 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.56■□□□□ 0.24
ZIC3O60481 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ZIC3O60481 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.55■□□□□ 0.24
ZIC3O60481 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
ZIC3O60481 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 KRT89P-201ENST00000620027 1478 ntBASIC16.55■□□□□ 0.24
ZIC3O60481 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.55■□□□□ 0.24
ZIC3O60481 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
ZIC3O60481 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
ZIC3O60481 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 AP003733.1-201ENST00000491725 852 ntBASIC16.55■□□□□ 0.24
ZIC3O60481 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.55■□□□□ 0.24
ZIC3O60481 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.55■□□□□ 0.24
ZIC3O60481 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.55■□□□□ 0.24
ZIC3O60481 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.55■□□□□ 0.24
ZIC3O60481 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.55■□□□□ 0.24
ZIC3O60481 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.55■□□□□ 0.24
ZIC3O60481 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 LINC01126-201ENST00000623515 1646 ntBASIC16.55■□□□□ 0.24
ZIC3O60481 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZIC3O60481 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.55■□□□□ 0.24
ZIC3O60481 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.55■□□□□ 0.24
ZIC3O60481 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms