Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20■□□□□ 0.79
EXTL3O43909 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EXTL3O43909 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EXTL3O43909 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20■□□□□ 0.79
EXTL3O43909 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20■□□□□ 0.79
EXTL3O43909 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20■□□□□ 0.79
EXTL3O43909 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EXTL3O43909 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20■□□□□ 0.79
EXTL3O43909 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EXTL3O43909 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.99■□□□□ 0.79
EXTL3O43909 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EXTL3O43909 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
EXTL3O43909 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EXTL3O43909 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EXTL3O43909 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EXTL3O43909 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
EXTL3O43909 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.99■□□□□ 0.79
EXTL3O43909 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
EXTL3O43909 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
EXTL3O43909 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
EXTL3O43909 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EXTL3O43909 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EXTL3O43909 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.99■□□□□ 0.79
EXTL3O43909 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.99■□□□□ 0.79
EXTL3O43909 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
EXTL3O43909 HYMAI.1-201ENST00000620949 238 ntBASIC19.99■□□□□ 0.79
EXTL3O43909 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.99■□□□□ 0.79
EXTL3O43909 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.99■□□□□ 0.79
EXTL3O43909 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
EXTL3O43909 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
EXTL3O43909 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EXTL3O43909 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EXTL3O43909 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
EXTL3O43909 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EXTL3O43909 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EXTL3O43909 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EXTL3O43909 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
EXTL3O43909 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EXTL3O43909 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.98■□□□□ 0.79
EXTL3O43909 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
EXTL3O43909 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.98■□□□□ 0.79
EXTL3O43909 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
EXTL3O43909 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.98■□□□□ 0.79
EXTL3O43909 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 AC112907.2-201ENST00000448639 330 ntBASIC19.98■□□□□ 0.79
EXTL3O43909 AC092597.1-201ENST00000487352 616 ntBASIC19.98■□□□□ 0.79
EXTL3O43909 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.98■□□□□ 0.79
EXTL3O43909 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.98■□□□□ 0.79
EXTL3O43909 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
EXTL3O43909 AL136038.4-201ENST00000603606 1261 ntBASIC19.98■□□□□ 0.79
EXTL3O43909 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.98■□□□□ 0.79
EXTL3O43909 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.98■□□□□ 0.79
EXTL3O43909 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.98■□□□□ 0.79
EXTL3O43909 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
EXTL3O43909 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EXTL3O43909 AL391807.1-203ENST00000604392 2365 ntBASIC19.98■□□□□ 0.79
EXTL3O43909 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
EXTL3O43909 AC009113.1-201ENST00000570267 2443 ntBASIC19.97■□□□□ 0.79
EXTL3O43909 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
EXTL3O43909 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.97■□□□□ 0.79
EXTL3O43909 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
EXTL3O43909 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EXTL3O43909 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EXTL3O43909 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EXTL3O43909 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.97■□□□□ 0.79
EXTL3O43909 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
EXTL3O43909 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
EXTL3O43909 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.97■□□□□ 0.79
EXTL3O43909 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.97■□□□□ 0.79
EXTL3O43909 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.97■□□□□ 0.79
EXTL3O43909 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EXTL3O43909 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.97■□□□□ 0.79
EXTL3O43909 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
EXTL3O43909 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
EXTL3O43909 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.97■□□□□ 0.79
EXTL3O43909 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.97■□□□□ 0.79
EXTL3O43909 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
EXTL3O43909 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
EXTL3O43909 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.97■□□□□ 0.79
EXTL3O43909 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.97■□□□□ 0.79
EXTL3O43909 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.97■□□□□ 0.79
EXTL3O43909 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.97■□□□□ 0.79
EXTL3O43909 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms