Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ACTN4O43707 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
ACTN4O43707 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
ACTN4O43707 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.7■□□□□ 0.9
ACTN4O43707 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACTN4O43707 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ACTN4O43707 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACTN4O43707 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.7■□□□□ 0.9
ACTN4O43707 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACTN4O43707 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACTN4O43707 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACTN4O43707 MIR718-201ENST00000390190 70 ntBASIC20.7■□□□□ 0.9
ACTN4O43707 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.7■□□□□ 0.9
ACTN4O43707 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.7■□□□□ 0.9
ACTN4O43707 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.7■□□□□ 0.9
ACTN4O43707 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.7■□□□□ 0.9
ACTN4O43707 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACTN4O43707 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACTN4O43707 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACTN4O43707 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ACTN4O43707 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.7■□□□□ 0.9
ACTN4O43707 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ACTN4O43707 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACTN4O43707 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.7■□□□□ 0.9
ACTN4O43707 HOXB1-202ENST00000577092 1414 ntBASIC20.7■□□□□ 0.9
ACTN4O43707 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACTN4O43707 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.69■□□□□ 0.9
ACTN4O43707 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.69■□□□□ 0.9
ACTN4O43707 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACTN4O43707 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ACTN4O43707 AL163051.1-201ENST00000569214 1512 ntBASIC20.69■□□□□ 0.9
ACTN4O43707 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.69■□□□□ 0.9
ACTN4O43707 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACTN4O43707 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACTN4O43707 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
ACTN4O43707 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACTN4O43707 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.69■□□□□ 0.9
ACTN4O43707 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.69■□□□□ 0.9
ACTN4O43707 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.69■□□□□ 0.9
ACTN4O43707 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
ACTN4O43707 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
ACTN4O43707 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ACTN4O43707 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.69■□□□□ 0.9
ACTN4O43707 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.69■□□□□ 0.9
ACTN4O43707 TSPY17P-201ENST00000450329 467 ntBASIC20.69■□□□□ 0.9
ACTN4O43707 AL355075.4-201ENST00000554988 638 ntBASIC20.69■□□□□ 0.9
ACTN4O43707 WWOX-216ENST00000569818 525 ntBASIC20.69■□□□□ 0.9
ACTN4O43707 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACTN4O43707 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
ACTN4O43707 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.69■□□□□ 0.9
ACTN4O43707 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.69■□□□□ 0.9
ACTN4O43707 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.69■□□□□ 0.9
ACTN4O43707 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACTN4O43707 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.69■□□□□ 0.9
ACTN4O43707 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACTN4O43707 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ACTN4O43707 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACTN4O43707 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACTN4O43707 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACTN4O43707 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ACTN4O43707 AC138028.4-201ENST00000564984 1845 ntBASIC20.69■□□□□ 0.9
ACTN4O43707 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACTN4O43707 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.69■□□□□ 0.9
ACTN4O43707 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.69■□□□□ 0.9
ACTN4O43707 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.69■□□□□ 0.9
ACTN4O43707 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACTN4O43707 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ACTN4O43707 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ACTN4O43707 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.68■□□□□ 0.9
ACTN4O43707 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
ACTN4O43707 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACTN4O43707 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACTN4O43707 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ACTN4O43707 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
ACTN4O43707 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACTN4O43707 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACTN4O43707 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ACTN4O43707 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
ACTN4O43707 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ACTN4O43707 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.68■□□□□ 0.9
ACTN4O43707 SNORA78-201ENST00000459373 127 ntBASIC20.68■□□□□ 0.9
ACTN4O43707 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ACTN4O43707 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACTN4O43707 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ACTN4O43707 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ACTN4O43707 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ACTN4O43707 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ACTN4O43707 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ACTN4O43707 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ACTN4O43707 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.68■□□□□ 0.9
ACTN4O43707 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACTN4O43707 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.67■□□□□ 0.9
ACTN4O43707 PHGDH-209ENST00000641074 1780 ntBASIC20.67■□□□□ 0.9
ACTN4O43707 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.67■□□□□ 0.9
ACTN4O43707 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ACTN4O43707 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.67■□□□□ 0.9
ACTN4O43707 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ACTN4O43707 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.67■□□□□ 0.9
ACTN4O43707 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACTN4O43707 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms