Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RIPK2O43353 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.76■□□□□ 0.59
RIPK2O43353 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RIPK2O43353 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
RIPK2O43353 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RIPK2O43353 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RIPK2O43353 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RIPK2O43353 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RIPK2O43353 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RIPK2O43353 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.76■□□□□ 0.59
RIPK2O43353 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RIPK2O43353 GMCL1P1-201ENST00000463439 1581 ntBASIC18.76■□□□□ 0.59
RIPK2O43353 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RIPK2O43353 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RIPK2O43353 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.76■□□□□ 0.59
RIPK2O43353 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RIPK2O43353 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RIPK2O43353 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
RIPK2O43353 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RIPK2O43353 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RIPK2O43353 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RIPK2O43353 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
RIPK2O43353 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.75■□□□□ 0.59
RIPK2O43353 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RIPK2O43353 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RIPK2O43353 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.75■□□□□ 0.59
RIPK2O43353 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RIPK2O43353 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.75■□□□□ 0.59
RIPK2O43353 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.75■□□□□ 0.59
RIPK2O43353 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.75■□□□□ 0.59
RIPK2O43353 AL445675.2-201ENST00000620291 557 ntBASIC18.75■□□□□ 0.59
RIPK2O43353 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RIPK2O43353 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RIPK2O43353 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.75■□□□□ 0.59
RIPK2O43353 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RIPK2O43353 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
RIPK2O43353 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.75■□□□□ 0.59
RIPK2O43353 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RIPK2O43353 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RIPK2O43353 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RIPK2O43353 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RIPK2O43353 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RIPK2O43353 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RIPK2O43353 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RIPK2O43353 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.74■□□□□ 0.59
RIPK2O43353 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.74■□□□□ 0.59
RIPK2O43353 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.74■□□□□ 0.59
RIPK2O43353 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RIPK2O43353 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RIPK2O43353 AC141586.5-201ENST00000624546 2050 ntBASIC18.74■□□□□ 0.59
RIPK2O43353 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RIPK2O43353 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RIPK2O43353 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RIPK2O43353 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.74■□□□□ 0.59
RIPK2O43353 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RIPK2O43353 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.74■□□□□ 0.59
RIPK2O43353 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.74■□□□□ 0.59
RIPK2O43353 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.74■□□□□ 0.59
RIPK2O43353 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.74■□□□□ 0.59
RIPK2O43353 MTDHP1-201ENST00000605323 784 ntBASIC18.74■□□□□ 0.59
RIPK2O43353 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.74■□□□□ 0.59
RIPK2O43353 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RIPK2O43353 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RIPK2O43353 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.74■□□□□ 0.59
RIPK2O43353 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.74■□□□□ 0.59
RIPK2O43353 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.74■□□□□ 0.59
RIPK2O43353 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RIPK2O43353 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RIPK2O43353 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RIPK2O43353 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
RIPK2O43353 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RIPK2O43353 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RIPK2O43353 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.73■□□□□ 0.59
RIPK2O43353 AL109659.2-201ENST00000606809 1674 ntBASIC18.73■□□□□ 0.59
RIPK2O43353 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RIPK2O43353 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RIPK2O43353 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.73■□□□□ 0.59
RIPK2O43353 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RIPK2O43353 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RIPK2O43353 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.73■□□□□ 0.59
RIPK2O43353 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RIPK2O43353 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RIPK2O43353 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
RIPK2O43353 AC004980.1-204ENST00000429707 299 ntBASIC18.73■□□□□ 0.59
RIPK2O43353 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.73■□□□□ 0.59
RIPK2O43353 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RIPK2O43353 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.73■□□□□ 0.59
RIPK2O43353 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.73■□□□□ 0.59
RIPK2O43353 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.73■□□□□ 0.59
RIPK2O43353 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.73■□□□□ 0.59
RIPK2O43353 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RIPK2O43353 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RIPK2O43353 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.73■□□□□ 0.59
RIPK2O43353 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.73■□□□□ 0.59
RIPK2O43353 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.73■□□□□ 0.59
RIPK2O43353 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RIPK2O43353 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RIPK2O43353 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RIPK2O43353 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RIPK2O43353 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms