Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP2A1O14983 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A1O14983 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A1O14983 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A1O14983 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ATP2A1O14983 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A1O14983 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ATP2A1O14983 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A1O14983 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A1O14983 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A1O14983 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A1O14983 AC005332.7-201ENST00000614046 2005 ntBASIC21.09■□□□□ 0.97
ATP2A1O14983 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ATP2A1O14983 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP2A1O14983 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A1O14983 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A1O14983 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A1O14983 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A1O14983 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A1O14983 AC113404.2-201ENST00000507884 177 ntBASIC21.09■□□□□ 0.97
ATP2A1O14983 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.09■□□□□ 0.97
ATP2A1O14983 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.09■□□□□ 0.97
ATP2A1O14983 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP2A1O14983 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A1O14983 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A1O14983 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A1O14983 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A1O14983 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ATP2A1O14983 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
ATP2A1O14983 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2A1O14983 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2A1O14983 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.08■□□□□ 0.97
ATP2A1O14983 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2A1O14983 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2A1O14983 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2A1O14983 EMBP1-201ENST00000458200 901 ntBASIC21.08■□□□□ 0.97
ATP2A1O14983 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
ATP2A1O14983 AC104692.2-201ENST00000603054 253 ntBASIC21.08■□□□□ 0.97
ATP2A1O14983 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATP2A1O14983 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATP2A1O14983 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATP2A1O14983 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATP2A1O14983 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A1O14983 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.07■□□□□ 0.96
ATP2A1O14983 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
ATP2A1O14983 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A1O14983 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A1O14983 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A1O14983 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A1O14983 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A1O14983 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A1O14983 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.07■□□□□ 0.96
ATP2A1O14983 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.07■□□□□ 0.96
ATP2A1O14983 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A1O14983 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.07■□□□□ 0.96
ATP2A1O14983 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A1O14983 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.07■□□□□ 0.96
ATP2A1O14983 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A1O14983 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A1O14983 AP005901.3-202ENST00000581653 237 ntBASIC21.07■□□□□ 0.96
ATP2A1O14983 AC008687.5-201ENST00000593746 558 ntBASIC21.07■□□□□ 0.96
ATP2A1O14983 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.07■□□□□ 0.96
ATP2A1O14983 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.07■□□□□ 0.96
ATP2A1O14983 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.07■□□□□ 0.96
ATP2A1O14983 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A1O14983 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A1O14983 AL049812.1-201ENST00000432563 2267 ntBASIC21.07■□□□□ 0.96
ATP2A1O14983 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.07■□□□□ 0.96
ATP2A1O14983 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A1O14983 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ATP2A1O14983 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP2A1O14983 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ATP2A1O14983 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A1O14983 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
ATP2A1O14983 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP2A1O14983 KRT8P10-201ENST00000450021 1447 ntBASIC21.06■□□□□ 0.96
ATP2A1O14983 LINC00167-201ENST00000530583 1419 ntBASIC21.06■□□□□ 0.96
ATP2A1O14983 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
ATP2A1O14983 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A1O14983 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A1O14983 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A1O14983 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A1O14983 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
ATP2A1O14983 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A1O14983 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A1O14983 DDT-203ENST00000403754 569 ntTSL 3 BASIC21.06■□□□□ 0.96
ATP2A1O14983 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
ATP2A1O14983 DDT-206ENST00000430101 573 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP2A1O14983 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.06■□□□□ 0.96
ATP2A1O14983 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A1O14983 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP2A1O14983 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A1O14983 LINC01711-201ENST00000598340 967 ntBASIC21.06■□□□□ 0.96
ATP2A1O14983 AC004263.2-201ENST00000617183 678 ntBASIC21.06■□□□□ 0.96
ATP2A1O14983 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A1O14983 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A1O14983 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP2A1O14983 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A1O14983 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP2A1O14983 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms