Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC29.75■■■□□ 2.35
CHD1O14646 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CHD1O14646 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
CHD1O14646 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CHD1O14646 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC29.75■■■□□ 2.35
CHD1O14646 GSAP-205ENST00000430584 600 ntTSL 5 BASIC29.75■■■□□ 2.35
CHD1O14646 BX005266.1-201ENST00000473402 457 ntBASIC29.75■■■□□ 2.35
CHD1O14646 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC29.75■■■□□ 2.35
CHD1O14646 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC29.75■■■□□ 2.35
CHD1O14646 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
CHD1O14646 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC29.75■■■□□ 2.35
CHD1O14646 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CHD1O14646 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
CHD1O14646 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC29.74■■■□□ 2.35
CHD1O14646 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CHD1O14646 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
CHD1O14646 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC29.74■■■□□ 2.35
CHD1O14646 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
CHD1O14646 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC29.74■■■□□ 2.35
CHD1O14646 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC29.74■■■□□ 2.35
CHD1O14646 MTMR9LP-203ENST00000426597 1545 ntBASIC29.74■■■□□ 2.35
CHD1O14646 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC29.74■■■□□ 2.35
CHD1O14646 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC29.74■■■□□ 2.35
CHD1O14646 AL031432.2-201ENST00000566714 459 ntBASIC29.74■■■□□ 2.35
CHD1O14646 AL928711.1-201ENST00000570165 459 ntBASIC29.74■■■□□ 2.35
CHD1O14646 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC29.74■■■□□ 2.35
CHD1O14646 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CHD1O14646 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CHD1O14646 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
CHD1O14646 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
CHD1O14646 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CHD1O14646 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC29.73■■■□□ 2.35
CHD1O14646 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CHD1O14646 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC29.73■■■□□ 2.35
CHD1O14646 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC29.73■■■□□ 2.35
CHD1O14646 MTCL1P1-201ENST00000446207 792 ntBASIC29.73■■■□□ 2.35
CHD1O14646 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC29.73■■■□□ 2.35
CHD1O14646 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC29.73■■■□□ 2.35
CHD1O14646 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC29.73■■■□□ 2.35
CHD1O14646 AL391422.3-201ENST00000603791 2761 ntBASIC29.73■■■□□ 2.35
CHD1O14646 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CHD1O14646 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CHD1O14646 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CHD1O14646 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CHD1O14646 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC29.72■■■□□ 2.35
CHD1O14646 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CHD1O14646 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
CHD1O14646 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC29.72■■■□□ 2.35
CHD1O14646 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC29.72■■■□□ 2.35
CHD1O14646 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC29.72■■■□□ 2.35
CHD1O14646 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC29.72■■■□□ 2.35
CHD1O14646 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CHD1O14646 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CHD1O14646 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CHD1O14646 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC29.72■■■□□ 2.35
CHD1O14646 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC29.72■■■□□ 2.35
CHD1O14646 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC29.72■■■□□ 2.35
CHD1O14646 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
CHD1O14646 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC29.71■■■□□ 2.35
CHD1O14646 UROS-202ENST00000368778 1556 ntTSL 2 BASIC29.71■■■□□ 2.35
CHD1O14646 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CHD1O14646 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC29.71■■■□□ 2.35
CHD1O14646 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC29.71■■■□□ 2.35
CHD1O14646 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC29.71■■■□□ 2.35
CHD1O14646 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
CHD1O14646 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CHD1O14646 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CHD1O14646 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
CHD1O14646 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CHD1O14646 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
CHD1O14646 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
CHD1O14646 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
CHD1O14646 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CHD1O14646 CEND1P1-201ENST00000451006 455 ntBASIC29.71■■■□□ 2.35
CHD1O14646 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC29.71■■■□□ 2.35
CHD1O14646 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC29.71■■■□□ 2.35
CHD1O14646 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CHD1O14646 AC009154.2-201ENST00000621177 724 ntBASIC29.71■■■□□ 2.35
CHD1O14646 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC29.71■■■□□ 2.35
CHD1O14646 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CHD1O14646 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC29.7■■■□□ 2.35
CHD1O14646 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.35
CHD1O14646 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC29.7■■■□□ 2.35
CHD1O14646 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CHD1O14646 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
CHD1O14646 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
CHD1O14646 AL024508.2-201ENST00000607749 1894 ntBASIC29.7■■■□□ 2.34
CHD1O14646 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
CHD1O14646 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC29.7■■■□□ 2.34
CHD1O14646 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC29.7■■■□□ 2.34
CHD1O14646 Z92544.3-201ENST00000624747 417 ntBASIC29.7■■■□□ 2.34
CHD1O14646 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
CHD1O14646 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
CHD1O14646 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
CHD1O14646 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
CHD1O14646 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CHD1O14646 SOD2-201ENST00000337404 991 ntTSL 2 BASIC29.69■■■□□ 2.34
CHD1O14646 STOM-202ENST00000347359 870 ntTSL 2 BASIC29.69■■■□□ 2.34
CHD1O14646 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC29.69■■■□□ 2.34
CHD1O14646 CD99-202ENST00000381180 530 ntTSL 2 BASIC29.69■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms