Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
FOXN3O00409 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
FOXN3O00409 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.76■□□□□ 0.75
FOXN3O00409 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.76■□□□□ 0.75
FOXN3O00409 AC128688.1-201ENST00000487626 519 ntBASIC19.76■□□□□ 0.75
FOXN3O00409 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.76■□□□□ 0.75
FOXN3O00409 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.76■□□□□ 0.75
FOXN3O00409 FAM87A-204ENST00000613235 858 ntBASIC19.76■□□□□ 0.75
FOXN3O00409 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.76■□□□□ 0.75
FOXN3O00409 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.76■□□□□ 0.75
FOXN3O00409 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
FOXN3O00409 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN3O00409 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.75■□□□□ 0.75
FOXN3O00409 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXN3O00409 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXN3O00409 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.75■□□□□ 0.75
FOXN3O00409 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.75■□□□□ 0.75
FOXN3O00409 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN3O00409 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
FOXN3O00409 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN3O00409 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN3O00409 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN3O00409 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN3O00409 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN3O00409 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXN3O00409 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN3O00409 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN3O00409 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN3O00409 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN3O00409 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXN3O00409 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN3O00409 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN3O00409 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN3O00409 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXN3O00409 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN3O00409 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXN3O00409 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN3O00409 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN3O00409 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
FOXN3O00409 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
FOXN3O00409 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN3O00409 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXN3O00409 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXN3O00409 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN3O00409 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN3O00409 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN3O00409 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXN3O00409 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN3O00409 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.74■□□□□ 0.75
FOXN3O00409 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.74■□□□□ 0.75
FOXN3O00409 AC112497.1-201ENST00000624824 639 ntBASIC19.74■□□□□ 0.75
FOXN3O00409 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
FOXN3O00409 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
FOXN3O00409 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXN3O00409 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN3O00409 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXN3O00409 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
FOXN3O00409 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
FOXN3O00409 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.73■□□□□ 0.75
FOXN3O00409 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXN3O00409 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.73■□□□□ 0.75
FOXN3O00409 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.73■□□□□ 0.75
FOXN3O00409 AC104390.1-201ENST00000555663 520 ntBASIC19.73■□□□□ 0.75
FOXN3O00409 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.73■□□□□ 0.75
FOXN3O00409 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXN3O00409 GMCL1P1-201ENST00000463439 1581 ntBASIC19.73■□□□□ 0.75
FOXN3O00409 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN3O00409 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
FOXN3O00409 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms