Protein–RNA interactions for Protein: B2RUZ4

SMIM1, Small integral membrane protein 1, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1B2RUZ4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 KRT8P11-201ENST00000409686 1436 ntBASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SMIM1B2RUZ4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 AC080080.1-201ENST00000625121 2420 ntBASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 AC108860.2-201ENST00000562760 2183 ntBASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 AL096828.2-201ENST00000567259 1965 ntBASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 HTR7P1-201ENST00000538670 1336 ntBASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 Z85996.1-201ENST00000494644 937 ntBASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 PRSS44-201ENST00000515154 1146 ntBASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 MYC-209ENST00000641252 345 ntBASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SMIM1B2RUZ4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 NBPF21P-201ENST00000425093 1451 ntBASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 CDCA4P2-201ENST00000441182 718 ntBASIC12.48□□□□□ -0.41
SMIM1B2RUZ4 AC026185.1-201ENST00000445748 174 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms