Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRIM6-TRIM34B2RNG4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
TRIM6-TRIM34B2RNG4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TRIM6-TRIM34B2RNG4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
TRIM6-TRIM34B2RNG4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC22.58■■□□□ 1.2
TRIM6-TRIM34B2RNG4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC22.58■■□□□ 1.2
TRIM6-TRIM34B2RNG4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
TRIM6-TRIM34B2RNG4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TRIM6-TRIM34B2RNG4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
TRIM6-TRIM34B2RNG4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 BICD1-207ENST00000551848 1962 ntBASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.57■■□□□ 1.2
TRIM6-TRIM34B2RNG4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 AP000593.1-201ENST00000393668 712 ntBASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRIM6-TRIM34B2RNG4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRIM6-TRIM34B2RNG4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms