Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.78■□□□□ 0.12
TMEM235A6NFC5 KRT8P11-201ENST00000409686 1436 ntBASIC15.77■□□□□ 0.12
TMEM235A6NFC5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 AC099398.1-201ENST00000567919 2776 ntBASIC15.77■□□□□ 0.12
TMEM235A6NFC5 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 AC009053.2-201ENST00000563701 2365 ntBASIC15.77■□□□□ 0.12
TMEM235A6NFC5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 Z85996.1-201ENST00000494644 937 ntBASIC15.77■□□□□ 0.12
TMEM235A6NFC5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TMEM235A6NFC5 AC004264.1-201ENST00000608354 794 ntBASIC15.77■□□□□ 0.12
TMEM235A6NFC5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMEM235A6NFC5 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TMEM235A6NFC5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TMEM235A6NFC5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TMEM235A6NFC5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMEM235A6NFC5 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.77■□□□□ 0.11
TMEM235A6NFC5 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMEM235A6NFC5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMEM235A6NFC5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.77■□□□□ 0.11
TMEM235A6NFC5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.77■□□□□ 0.11
TMEM235A6NFC5 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.77■□□□□ 0.11
TMEM235A6NFC5 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMEM235A6NFC5 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.77■□□□□ 0.11
TMEM235A6NFC5 KRT8P3-201ENST00000519669 1449 ntBASIC15.77■□□□□ 0.11
TMEM235A6NFC5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TMEM235A6NFC5 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TMEM235A6NFC5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 TSPY6P-201ENST00000448518 926 ntBASIC15.76■□□□□ 0.11
TMEM235A6NFC5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 AC012317.2-201ENST00000623305 2251 ntBASIC15.76■□□□□ 0.11
TMEM235A6NFC5 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TMEM235A6NFC5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM235A6NFC5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM235A6NFC5 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM235A6NFC5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.75■□□□□ 0.11
TMEM235A6NFC5 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TMEM235A6NFC5 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.75■□□□□ 0.11
TMEM235A6NFC5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TMEM235A6NFC5 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM235A6NFC5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.75■□□□□ 0.11
TMEM235A6NFC5 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.75■□□□□ 0.11
TMEM235A6NFC5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.75■□□□□ 0.11
TMEM235A6NFC5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.75■□□□□ 0.11
TMEM235A6NFC5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TMEM235A6NFC5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.75■□□□□ 0.11
TMEM235A6NFC5 AC098934.4-201ENST00000564127 592 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms