Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 VENTXP7-201ENST00000475503 772 ntBASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 AC099336.1-202ENST00000602961 463 ntBASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 KRT17P6-201ENST00000453795 1220 ntBASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 AC083906.6-201ENST00000641366 219 ntBASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TBC1D3BA6NDS4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 RN7SL606P-201ENST00000472779 293 ntBASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TBC1D3BA6NDS4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 KRT8P10-201ENST00000450021 1447 ntBASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 HCG11-201ENST00000411553 5696 ntBASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 FDX1P1-201ENST00000449115 551 ntBASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 AC011840.4-201ENST00000578471 627 ntBASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TBC1D3BA6NDS4 AC099343.3-201ENST00000605834 2503 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms