Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 AL355355.2-201ENST00000442321 338 ntBASIC16.71■□□□□ 0.27
TMEM129A0AVI4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 AC068587.9-201ENST00000641814 219 ntBASIC16.71■□□□□ 0.27
TMEM129A0AVI4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM129A0AVI4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TMEM129A0AVI4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TMEM129A0AVI4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TMEM129A0AVI4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TMEM129A0AVI4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TMEM129A0AVI4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
TMEM129A0AVI4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 NUDT16P1-203ENST00000513809 620 ntBASIC16.7■□□□□ 0.26
TMEM129A0AVI4 BX088651.1-201ENST00000540551 451 ntBASIC16.7■□□□□ 0.26
TMEM129A0AVI4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 REXO1L12P-201ENST00000622156 912 ntBASIC16.7■□□□□ 0.26
TMEM129A0AVI4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
TMEM129A0AVI4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.69■□□□□ 0.26
TMEM129A0AVI4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 AC073912.3-201ENST00000624414 853 ntBASIC16.69■□□□□ 0.26
TMEM129A0AVI4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 KRT16P1-201ENST00000399124 1418 ntBASIC16.69■□□□□ 0.26
TMEM129A0AVI4 AC112777.1-201ENST00000540175 1423 ntBASIC16.69■□□□□ 0.26
TMEM129A0AVI4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM129A0AVI4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms