Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRAV5A0A0B4J249 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 AC106820.2-201ENST00000563775 3264 ntBASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 KRT8P3-201ENST00000519669 1449 ntBASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV5A0A0B4J249 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 AC133041.1-202ENST00000642053 222 ntBASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAV5A0A0B4J249 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV5A0A0B4J249 AC069152.1-201ENST00000438030 544 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms