Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 RPS2P52-201ENST00000469610 820 ntBASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 AC120498.8-201ENST00000614275 531 ntBASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV16A0A0A6YYK6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC12.9□□□□□ -0.35
TRAV16A0A0A6YYK6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRAV16A0A0A6YYK6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRAV16A0A0A6YYK6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 TEX21P-204ENST00000641479 1693 ntBASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 AC126763.1-201ENST00000552015 2118 ntBASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 FAM201B-201ENST00000458407 597 ntBASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 AC026366.1-201ENST00000488803 879 ntBASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV16A0A0A6YYK6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV16A0A0A6YYK6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms