Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USH1CQ9Y6N9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.41■□□□□ 0.54
USH1CQ9Y6N9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USH1CQ9Y6N9 AC108860.2-201ENST00000562760 2183 ntBASIC18.41■□□□□ 0.54
USH1CQ9Y6N9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USH1CQ9Y6N9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
USH1CQ9Y6N9 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.39■□□□□ 0.54
USH1CQ9Y6N9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
USH1CQ9Y6N9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.39■□□□□ 0.54
USH1CQ9Y6N9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
USH1CQ9Y6N9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
USH1CQ9Y6N9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
USH1CQ9Y6N9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.39■□□□□ 0.54
USH1CQ9Y6N9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
USH1CQ9Y6N9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USH1CQ9Y6N9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USH1CQ9Y6N9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USH1CQ9Y6N9 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
USH1CQ9Y6N9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
USH1CQ9Y6N9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USH1CQ9Y6N9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USH1CQ9Y6N9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
USH1CQ9Y6N9 MYC-208ENST00000641036 567 ntBASIC18.39■□□□□ 0.53
USH1CQ9Y6N9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
USH1CQ9Y6N9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.39■□□□□ 0.53
USH1CQ9Y6N9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USH1CQ9Y6N9 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USH1CQ9Y6N9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
USH1CQ9Y6N9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
USH1CQ9Y6N9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USH1CQ9Y6N9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USH1CQ9Y6N9 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 AL121829.2-201ENST00000620908 328 ntBASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USH1CQ9Y6N9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USH1CQ9Y6N9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.37■□□□□ 0.53
USH1CQ9Y6N9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USH1CQ9Y6N9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
USH1CQ9Y6N9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.37■□□□□ 0.53
USH1CQ9Y6N9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USH1CQ9Y6N9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USH1CQ9Y6N9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
USH1CQ9Y6N9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USH1CQ9Y6N9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USH1CQ9Y6N9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USH1CQ9Y6N9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms