Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 AC074051.2-201ENST00000565115 352 ntBASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 AC138894.3-201ENST00000603787 634 ntBASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.28■□□□□ 0.52
SNX11Q9Y5W9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 LINC00167-201ENST00000530583 1419 ntBASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.27■□□□□ 0.52
SNX11Q9Y5W9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SNX11Q9Y5W9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SNX11Q9Y5W9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SNX11Q9Y5W9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 KRT8P32-201ENST00000512863 1461 ntBASIC18.26■□□□□ 0.51
SNX11Q9Y5W9 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SNX11Q9Y5W9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms