Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA11Q9Y5H2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 TSPY17P-201ENST00000450329 467 ntBASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 FITM1-202ENST00000559294 800 ntBASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA11Q9Y5H2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 MIR4497-201ENST00000583208 89 ntBASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 AP000525.1-201ENST00000608286 694 ntBASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA11Q9Y5H2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 AC034236.2-201ENST00000606662 1610 ntBASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 CCR12P-201ENST00000446203 998 ntBASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 AL353719.1-201ENST00000566847 864 ntBASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 AL023803.3-201ENST00000615559 522 ntBASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms