Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGA4Q9Y5G9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 KRT18P48-201ENST00000434763 852 ntBASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 CKBP1-201ENST00000565489 1086 ntBASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 IRX1P1-201ENST00000438849 1838 ntBASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGA4Q9Y5G9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 AC007663.1-201ENST00000438948 1240 ntBASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 AL121956.5-201ENST00000625261 221 ntBASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGA4Q9Y5G9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 FEM1AP3-201ENST00000403722 1741 ntBASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 FP475955.4-201ENST00000623131 1990 ntBASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 PCED1CP-201ENST00000419887 785 ntBASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 AC141257.4-201ENST00000634557 245 ntBASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 AC136944.6-201ENST00000634818 245 ntBASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGA4Q9Y5G9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHGA4Q9Y5G9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms