Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 AC073592.3-201ENST00000625118 1834 ntBASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 MIR564-202ENST00000385049 94 ntBASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 KRT18P41-201ENST00000518924 1277 ntBASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 MIR3180-5-201ENST00000583743 153 ntBASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 AC069148.1-201ENST00000608741 768 ntBASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCDHB1Q9Y5F3 AC005082.1-201ENST00000413042 2259 ntBASIC18.46■□□□□ 0.54
PCDHB1Q9Y5F3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PCDHB1Q9Y5F3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 VENTXP5-201ENST00000523979 775 ntBASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCDHB1Q9Y5F3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PCDHB1Q9Y5F3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms