Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
LINC00588Q9Y4M8 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 AC024563.2-201ENST00000603282 481 ntBASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 AC092119.3-201ENST00000612618 583 ntBASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00588Q9Y4M8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 AC112777.1-201ENST00000540175 1423 ntBASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 Z83836.1-201ENST00000624605 1642 ntBASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 AC005332.3-201ENST00000589904 676 ntBASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 NPAP1P7-201ENST00000613027 823 ntBASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
LINC00588Q9Y4M8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LINC00588Q9Y4M8 MYLKP1-201ENST00000509077 1580 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms